RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 C11orf71Q6IPW1 123 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 GTF2IRD2Q86UP8 949 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 BANPQ8N9N5 519 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ACTRT2Q8TDY3 377 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
CD4-212ENST00000544344 KLHL15Q96M94 604 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 AMDHD1Q96NU7 426 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 MRPL57Q9BQC6 102 aaKnown RBP13.72□□□□□ -0.21
CD4-212ENST00000544344 ALG2Q9H553 416 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
CD4-212ENST00000544344 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
CD4-212ENST00000544344 ULK1O75385 1050 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 OXSR1O95747 527 aaPredicted RBP13.71□□□□□ -0.21
CD4-212ENST00000544344 NGFRP08138 427 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
CD4-212ENST00000544344 CASP9P55211 416 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 CARD18P57730 90 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 SLC18A2Q05940 514 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ITGADQ13349 1161 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 P2RY6Q15077 328 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 UNC50Q53HI1 259 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 FAM71E1Q6IPT2 247 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ZAR1Q86SH2 424 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 TRABD2AQ86V40 505 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ZNF382Q96SR6 550 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
CD4-212ENST00000544344 ACSS3Q9H6R3 686 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 NPAP1Q9NZP6 1156 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 ING1Q9UK53 422 aaPredicted RBP13.71□□□□□ -0.21
CD4-212ENST00000544344 GRID1Q9ULK0 1009 aa13.71□□□□□ -0.21
CD4-212ENST00000544344 GOLGA8QA0A0J9YX86 632 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 GOLGA8OA6NCC3 632 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 GOLGA8NF8WBI6 632 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 GOLGA8RI6L899 631 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 HAX1O00165 279 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 NDUFB5O43674 189 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 NKX2-2O95096 273 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 FESP07332 822 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 LINGO3P0C6S8 592 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 COL6A2P12110 1019 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 EDNRAP25101 427 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 GSTM5P46439 218 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 NUDT6P53370 316 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 MANFP55145 182 aaKnown RBP13.7□□□□□ -0.22
CD4-212ENST00000544344 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 RASA2Q15283 850 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
CD4-212ENST00000544344 ZNHIT3Q15649 155 aaPredicted RBP13.7□□□□□ -0.22
CD4-212ENST00000544344 BHLHA15Q7RTS1 189 aaPredicted RBP13.7□□□□□ -0.22
CD4-212ENST00000544344 TDRPQ86YL5 185 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 METTL6Q8TCB7 284 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 HTRA1Q92743 480 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 USB1Q9BQ65 265 aaKnown RBP13.7□□□□□ -0.22
CD4-212ENST00000544344 CACNG6Q9BXT2 260 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 AMBRA1Q9C0C7 1298 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 GP6Q9HCN6 339 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 LPAR3Q9UBY5 353 aa13.7□□□□□ -0.22
CD4-212ENST00000544344 ABCD4O14678 606 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 KCNH1O95259 989 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 YES1P07947 543 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 IFI6P09912 130 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 PABPC4LP0CB38 370 aaKnown RBP13.69□□□□□ -0.22
CD4-212ENST00000544344 IGHV4-31P0DP07 118 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 ME2P23368 584 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 SFTPDP35247 375 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 ZNF41P51814 821 aaPredicted RBP13.69□□□□□ -0.22
CD4-212ENST00000544344 CDH11P55287 796 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 DSCR9P59020 149 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 BTKQ06187 659 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 ZNF763Q0D2J5 394 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
CD4-212ENST00000544344 ZNF678Q5SXM1 525 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 PDSS1Q5T2R2 415 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 AGAP6Q5VW22 663 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 Q6ZT83 130 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 GPRIN3Q6ZVF9 776 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 ZNF525Q8N782 197 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 GPR151Q8TDV0 419 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 CPNE4Q96A23 557 aaPredicted RBP13.69□□□□□ -0.22
CD4-212ENST00000544344 SH3YL1Q96HL8 342 aaPredicted RBP13.69□□□□□ -0.22
CD4-212ENST00000544344 TMEM237Q96Q45 408 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 FUT8Q9BYC5 575 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 C3orf14Q9HBI5 128 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 FAIMQ9NVQ4 179 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 PRSS50Q9UI38 385 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
CD4-212ENST00000544344 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms