RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SIAH3Q8IW03 269 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 FAM109AQ8N4B1 249 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 HIPK4Q8NE63 616 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 OR4K17Q8NGC6 315 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 BBS10Q8TAM1 723 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 PHOSPHO1Q8TCT1 267 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 OIT3Q8WWZ8 545 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 NR4A3Q92570 626 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 ZNF583Q96ND8 569 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 BARD1Q99728 777 aaKnown RBP12.42□□□□□ -0.42
SP140-213ENST00000543928 SLX1AQ9BQ83 275 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 DEFB127Q9H1M4 99 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 DSN1Q9H410 356 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 MED11Q9P086 117 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 SUCOQ9UBS9 1254 aaKnown RBP12.42□□□□□ -0.42
SP140-213ENST00000543928 FBXL2Q9UKC9 423 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 NPIPA1Q9UND3 350 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 ANGPT4Q9Y264 503 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 AP3M1Q9Y2T2 418 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 IGLV3-32A0A0A0MS00 114 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 FAM220BPB1ANY3 271 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 B2RBV5 119 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 GTPBP1O00178 669 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 OIP5O43482 229 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 HCRTR2O43614 444 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 GMFGO60234 142 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 CBR3O75828 277 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 WISP2O76076 250 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 UBOX5O94941 541 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 CELA3AP09093 270 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 IL7RP16871 459 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 GDF1P27539 372 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 AQP1P29972 269 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 PCGF2P35227 344 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 TLE1Q04724 770 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 LIPEQ05469 1076 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 TOMM20Q15388 145 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 VMACQ2NL98 169 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 CMPK2Q5EBM0 449 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 IFNEQ86WN2 208 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 PEX5LQ8IYB4 626 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 PGAM4Q8N0Y7 254 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 FADS6Q8N9I5 356 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 OR2M3Q8NG83 312 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 OR52P1PQ8NH57 321 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 WDR60Q8WVS4 1066 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 SH3YL1Q96HL8 342 aaPredicted RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 REXO5Q96IC2 774 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 UBQLN3Q9H347 655 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 ZDHHC11Q9H8X9 412 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 HHATLQ9HCP6 504 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 SPAG4Q9NPE6 437 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 QPCTLQ9NXS2 382 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 GMPR2Q9P2T1 348 aaKnown RBP12.41□□□□□ -0.42
SP140-213ENST00000543928 NCKAP5O14513 1909 aa12.41□□□□□ -0.42
SP140-213ENST00000543928 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 NBASA2RRP1 2371 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 CLDN24A6NM45 220 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 TRAPPC6AO75865 159 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 CSTAP01040 98 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 UBL4AP11441 157 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ETS2P15036 469 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ENDOUP21128 410 aaKnown RBP12.4□□□□□ -0.42
SP140-213ENST00000543928 ADH7P40394 386 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 TDGF1P3P51864 188 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 KCNJ10P78508 379 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ZNF117Q03924 483 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 SLC10A1Q14973 349 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ERICH5Q6P6B1 374 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 C16orf89Q6UX73 402 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
SP140-213ENST00000543928 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
SP140-213ENST00000543928 VRK2Q86Y07 508 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 SLC30A8Q8IWU4 369 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 OR2T12Q8NG77 320 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 B4GALNT2Q8NHY0 566 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 GPR137Q96N19 417 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 PTGES2Q9H7Z7 377 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ADA2Q9NZK5 511 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 TMEM181Q9P2C4 612 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 ABCD2Q9UBJ2 740 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 SLC35A3Q9Y2D2 325 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 CARD8Q9Y2G2 431 aa12.4□□□□□ -0.42
SP140-213ENST00000543928 GPC6Q9Y625 555 aaPredicted RBP12.4□□□□□ -0.42
SP140-213ENST00000543928 ZNF407Q9C0G0 2248 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 RP1L1Q8IWN7 2480 aaPredicted RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 PCNX3Q9H6A9 2034 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF264O43296 627 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms