RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 ARSKQ6UWY0 536 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 MTERF4Q7Z6M4 381 aaKnown RBP17.26■□□□□ 0.35
SPPL3-208ENST00000543854 ACTRT2Q8TDY3 377 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 SMPDL3BQ92485 455 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 ZNF75CPQ92670 426 aaPredicted RBP17.26■□□□□ 0.35
SPPL3-208ENST00000543854 TEX37Q96LM6 180 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 SFXN3Q9BWM7 321 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 SERHL2Q9H4I8 314 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 KCNE3Q9Y6H6 103 aa17.26■□□□□ 0.35
SPPL3-208ENST00000543854 NPIPA5A0A0B4J1W7 369 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 EEF1E1-BLOC1S5C9J1V9 151 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 C9JVG2 144 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 NPIPA7E9PJI5 369 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 EEF1E1O43324 174 aaKnown RBP17.25■□□□□ 0.35
SPPL3-208ENST00000543854 HCRTR2O43614 444 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 SCN2BO60939 215 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 AGR2O95994 175 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 IL18BPO95998 194 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 NPIPA8P0DM63 369 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 UQCRC2P22695 453 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 UQCRC1P31930 480 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 CHI3L1P36222 383 aaPredicted RBP17.25■□□□□ 0.35
SPPL3-208ENST00000543854 PHC1P78364 1004 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 TMEM44Q2T9K0 475 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 TTMPQ5BVD1 217 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 HDXQ7Z353 690 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 MAVSQ7Z434 540 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 P4HA3Q7Z4N8 544 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 ZNF614Q8N883 585 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 B4GALNT2Q8NHY0 566 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 PHOSPHO1Q8TCT1 267 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 ZBTB8AQ96BR9 441 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 MAELQ96JY0 434 aaKnown RBP17.25■□□□□ 0.35
SPPL3-208ENST00000543854 MED17Q9NVC6 651 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 EXD2Q9NVH0 621 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 STOML1Q9UBI4 398 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 BTNL2Q9UIR0 455 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 ZNF337Q9Y3M9 751 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 GPR45Q9Y5Y3 372 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 AP4B1Q9Y6B7 739 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 CSMD1Q96PZ7 3565 aa17.25■□□□□ 0.35
SPPL3-208ENST00000543854 C7orf72A4D263 438 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SLC22A20A6NK97 555 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SHISA8B8ZZ34 492 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 DIAPH2O60879 1101 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 RCBTB2O95199 551 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PGRP06401 933 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PEX19P40855 299 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 KHKP50053 298 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 ATP12AP54707 1039 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 TLE4Q04727 773 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 LRRC74AQ0VAA2 488 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 MYBPHQ13203 477 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PLPPR5Q32ZL2 321 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 FBXL19-AS1Q494R0 122 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 KLHL26Q53HC5 615 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SAXO2Q658L1 398 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 POMZP3Q6PJE2 187 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PLXDC2Q6UX71 529 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 C16orf62Q7Z3J2 963 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 GCNT2Q8N0V5 402 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 GLB1L3Q8NCI6 653 aaPredicted RBP17.24■□□□□ 0.35
SPPL3-208ENST00000543854 CHDHQ8NE62 594 aaPredicted RBP17.24■□□□□ 0.35
SPPL3-208ENST00000543854 MIPOL1Q8TD10 442 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 LRRC8CQ8TDW0 803 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 RNASE6Q93091 150 aaKnown RBP17.24■□□□□ 0.35
SPPL3-208ENST00000543854 C7orf26Q96N11 449 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 CCDC115Q96NT0 180 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PANX1Q96RD7 426 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SDF2Q99470 211 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SH3GL2Q99962 352 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 SLC35A5Q9BS91 424 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 OR51I1Q9H343 314 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 KCNN3Q9UGI6 736 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 FOXD3Q9UJU5 478 aaPredicted RBP17.24■□□□□ 0.35
SPPL3-208ENST00000543854 L3MBTL1Q9Y468 752 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 PCNX3Q9H6A9 2034 aa17.24■□□□□ 0.35
SPPL3-208ENST00000543854 MYO9AB2RTY4 2548 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 ANKHD1Q8IWZ3 2542 aaKnown RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 CSMD2Q7Z408 3487 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 HMGB1P1B2RPK0 211 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 STX11O75558 287 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 RNF144AP50876 292 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 AGFG1P52594 562 aaKnown RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 SUMO3P55854 103 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 DLX5P56178 289 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 CLDN20P56880 219 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 RPS3AP61247 264 aaKnown RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 ZNF117Q03924 483 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 FOXF2Q12947 444 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 SLC9B1Q4ZJI4 515 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 PDCD4Q53EL6 469 aaKnown RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.23■□□□□ 0.351e-7■■■■■ 31
SPPL3-208ENST00000543854 ATAD3BQ5T9A4 648 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 OR2A2Q6IF42 318 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 TNFAIP8L2Q6P589 184 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 GTPBP8Q8N3Z3 284 aaPredicted RBP17.23■□□□□ 0.35
SPPL3-208ENST00000543854 TRIML2Q8N7C3 387 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 DYDC1Q8WWB3 177 aa17.23■□□□□ 0.35
SPPL3-208ENST00000543854 INTS12Q96CB8 462 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms