RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 NKX2-2O95096 273 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 OXSR1O95747 527 aaPredicted RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 ME2P23368 584 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 PRKAA2P54646 552 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 PKNOX1P55347 436 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 SLC18A2Q05940 514 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 LCP2Q13094 533 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 GLE1Q53GS7 698 aaKnown RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 TMEM201Q5SNT2 666 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF572Q7Z3I7 529 aaPredicted RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 NUFIP2Q7Z417 695 aaKnown RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 TRABD2AQ86V40 505 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 MMGT1Q8N4V1 131 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 PIWIL2Q8TC59 973 aaKnown RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 FAM110BQ8TC76 370 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 KLHL15Q96M94 604 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 USB1Q9BQ65 265 aaKnown RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 GRIP2Q9C0E4 1043 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 CDC42EP4Q9H3Q1 356 aaKnown RBP17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
LPCAT3-211ENST00000543794 CR1P17927 2039 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 DPRXA6NFQ7 191 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 NTN1O95631 604 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 CD8AP01732 235 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 FESP07332 822 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 SNRPAP09012 282 aaKnown RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 PRPS2P11908 318 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 IL32P24001 234 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 ATP5F1P24539 256 aaPredicted RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF41P51814 821 aaPredicted RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 FAPQ12884 760 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 RNPS1Q15287 305 aaKnown RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 SEZ6L2Q6UXD5 910 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 ATG4DQ86TL0 474 aaPredicted RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 LILRA2Q8N149 483 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 GATSQ8NAP1 163 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 FAM76AQ8TAV0 307 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 RNF128Q8TEB7 428 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 ABHD3Q8WU67 409 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 TRAF4Q9BUZ4 470 aaPredicted RBP17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 TRIM2Q9C040 744 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 GP6Q9HCN6 339 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 CADP27708 2225 aa17.74■□□□□ 0.43
LPCAT3-211ENST00000543794 NBEAL1Q6ZS30 2694 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 BSPH1Q075Z2 132 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 P2RY6Q15077 328 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF239Q16600 458 aaKnown RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 VPS26BQ4G0F5 336 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 TIFABQ6ZNK6 161 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF551Q7Z340 670 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 SLC22A9Q8IVM8 553 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 TUSC5Q8IXB3 177 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF619Q8N2I2 560 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 KBTBD8Q8NFY9 601 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 KISS1RQ969F8 398 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 L3HYPDHQ96EM0 354 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 REXO5Q96IC2 774 aaKnown RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 HS6ST2Q96MM7 605 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 KLHDC3Q9BQ90 382 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 BARX1Q9HBU1 254 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 EQTNQ9NQ60 294 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 TIGARQ9NQ88 270 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 KLHL13Q9P2N7 655 aa17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 GDF2Q9UK05 429 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 POLR3HQ9Y535 204 aaPredicted RBP17.73■□□□□ 0.43
LPCAT3-211ENST00000543794 F12P00748 615 aaPredicted RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 ADAP00813 363 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 LINGO3P0C6S8 592 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 FAM157CP0CG43 387 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 SHC1P29353 583 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CASQ1P31415 396 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 EIF1P41567 113 aaKnown RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 MANFP55145 182 aaKnown RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 FOXA1P55317 472 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 ITGADQ13349 1161 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 IKBIPQ70UQ0 350 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 TRIM46Q7Z4K8 759 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 ZAR1Q86SH2 424 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 DTX2Q86UW9 622 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 MISPQ8IVT2 679 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CEP112Q8N8E3 955 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CDRT4Q8N9R6 151 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 OR6Y1Q8NGX8 325 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CEP70Q8NHQ1 597 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CPNE4Q96A23 557 aaPredicted RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 SH3YL1Q96HL8 342 aaPredicted RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 SRXN1Q9BYN0 137 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 GRPEL1Q9HAV7 217 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 UBQLN4Q9NRR5 601 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 CISD1Q9NZ45 108 aaKnown RBP17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 NTMQ9P121 344 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 ALPK2Q86TB3 2170 aa17.72■□□□□ 0.43
LPCAT3-211ENST00000543794 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 ZNF814B7Z6K7 855 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 PHF1O43189 567 aaPredicted RBP17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 EFNA2O43921 213 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 GPRIN2O60269 458 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 PRKD3O94806 890 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 KCNK2O95069 426 aa17.71■□□□□ 0.43
LPCAT3-211ENST00000543794 YES1P07947 543 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms