RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SLC1A3P43003 542 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 ALKAL1Q6UXT8 129 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 ERN2Q76MJ5 926 aaKnown RBP18.22■□□□□ 0.51
SUDS3-204ENST00000543473 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 CNTNAP3BQ96NU0 1288 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 SFXN1Q9H9B4 322 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 CA3P07451 260 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 PSPHP78330 225 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 SIM1P81133 766 aaPredicted RBP18.22■□□□□ 0.51
SUDS3-204ENST00000543473 NNATQ16517 81 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 FIBINQ8TAL6 211 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 RBP7Q96R05 134 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 MRI1Q9BV20 369 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 EGLN3Q9H6Z9 239 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 COPS3Q9UNS2 423 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 KCNIP3Q9Y2W7 256 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 PRAMEF2O60811 474 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 VIPR2P41587 438 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 HTR3AP46098 478 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 KIAA1211LQ6NV74 962 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 B3GLCTQ6Y288 498 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 ZNF559Q9BR84 538 aa18.22■□□□□ 0.51
SUDS3-204ENST00000543473 DIMT1Q9UNQ2 313 aaKnown RBP18.22■□□□□ 0.51
SUDS3-204ENST00000543473 POLR2CP19387 275 aaPredicted RBP18.21■□□□□ 0.51
SUDS3-204ENST00000543473 CD6P30203 668 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 PBX2P40425 430 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 TAGLNQ01995 201 aaKnown RBP18.21■□□□□ 0.51
SUDS3-204ENST00000543473 CFAP77Q6ZQR2 320 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 RIMKLAQ8IXN7 391 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 SLC7A13Q8TCU3 470 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 A0A1W2PPL8 197 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 TARM1B6A8C7 271 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 NDUFB2O95178 105 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 C1QBP02746 253 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 FBXO45P0C2W1 286 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 DLSTP36957 453 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 TMEM239Q8WW34 195 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 G6PC3Q9BUM1 346 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 OR52D1Q9H346 318 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 FAM227AF5H4B4 570 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 CSF1P09603 554 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 HOXD9P28356 352 aaPredicted RBP18.21■□□□□ 0.51
SUDS3-204ENST00000543473 PTPRRQ15256 657 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 HBMQ6B0K9 141 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 RASGEF1AQ8N9B8 481 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 SYNPRQ8TBG9 265 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 LKAAEAR1Q8TD35 194 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 NEDD4LQ96PU5 975 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 TREX2Q9BQ50 279 aaPredicted RBP18.21■□□□□ 0.51
SUDS3-204ENST00000543473 HOXD1Q9GZZ0 328 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 NUMA1Q14980 2115 aa18.21■□□□□ 0.51
SUDS3-204ENST00000543473 HEPACAM2A8MVW5 462 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 MC3RP41968 323 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 NRG3P56975 720 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 SPIN3Q5JUX0 258 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 NKAPLQ5M9Q1 402 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 LEG1Q6P5S2 330 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 TMEM25Q86YD3 366 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 SLC35F2Q8IXU6 374 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 OR2T4Q8NH00 348 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF566Q969W8 418 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 ELP4Q96EB1 424 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 BIN3Q9NQY0 253 aa18.21■□□□□ 0.5
SUDS3-204ENST00000543473 NKPD1Q17RQ9 610 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 APOOLQ6UXV4 268 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 FAM83HQ6ZRV2 1179 aaPredicted RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 SPNS2Q8IVW8 549 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 NRSN1Q8IZ57 195 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 C1QTNF2Q9BXJ5 285 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 SERINC1Q9NRX5 453 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 TCRBP04435 133 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 BLKP51451 505 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 EMP3P54852 163 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 BTLAQ7Z6A9 289 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 NOX1Q9Y5S8 564 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 PSMB1P20618 241 aaKnown RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 MEPCEQ7L2J0 689 aaKnown RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 BCDIN3DQ7Z5W3 292 aaKnown RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 SMARCD2Q92925 531 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 PHB2Q99623 299 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 CXXC1Q9P0U4 656 aaPredicted RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 HOXC13P31276 330 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 GLP1RP43220 463 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 ASAH1Q13510 395 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 DHCR24Q15392 516 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 CTF1Q16619 201 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 TCEAL6Q6IPX3 200 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 L3MBTL4Q8NA19 623 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 OR5AR1Q8NGP9 310 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF480Q8WV37 535 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 YIPF6Q96EC8 236 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 ZNF582Q96NG8 517 aaPredicted RBP18.2■□□□□ 0.5
SUDS3-204ENST00000543473 PELI2Q9HAT8 420 aa18.2■□□□□ 0.5
SUDS3-204ENST00000543473 RHPN2P1A8MT19 583 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 SLC38A5Q8WUX1 472 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 DNAJA3Q96EY1 480 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 NAALAD2Q9Y3Q0 740 aa18.19■□□□□ 0.5
SUDS3-204ENST00000543473 V9GY05 133 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms