RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CTSL3PQ5NE16 218 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GLT8D1Q68CQ7 371 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CNTN4Q8IWV2 1026 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 TIGD4Q8IY51 512 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MFSD9Q8NBP5 474 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OR8S1Q8NH09 359 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OR8K3Q8NH51 312 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 OR1E3Q8WZA6 343 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 BORCS5Q969J3 196 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 MAL2Q969L2 176 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CIDECQ96AQ7 238 aaPredicted RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC29A1Q99808 456 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 PSD2Q9BQI7 771 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 YTHDF1Q9BYJ9 559 aaKnown RBP6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 ARRDC1-AS1Q9H2J1 176 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 EPHX3Q9H6B9 360 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 SMURF1Q9HCE7 757 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 THSD1Q9NS62 852 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 C2orf42Q9NWW7 574 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 NENFQ9UMX5 172 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 CDH10Q9Y6N8 788 aa6.49□□□□□ -1.37
SRGAP1-206ENST00000543397 BRWD1Q9NSI6 2320 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 G3V2L1 256 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RNASET2O00584 256 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RIDAP52758 137 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 EEF1A1P68104 462 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 EXOSC7Q15024 291 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 METTL25Q8N6Q8 603 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 OR4K5Q8NGD3 323 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 OR8J1Q8NGP2 316 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ASB12Q8WXK4 309 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SCGB3A2Q96PL1 93 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SEMA4CQ9C0C4 833 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SEMA6CQ9H3T2 930 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RXFP3Q9NSD7 469 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 BTNL2Q9UIR0 455 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 BAIAP2Q9UQB8 552 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 EVPLQ92817 2033 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ANKRD12Q6UB98 2062 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 HTRA2O43464 458 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 GALR3O60755 368 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 GRK5P34947 590 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 CCR5P51681 352 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 BMXP51813 675 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB38P57729 211 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 OR1D5P58170 312 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 GNG2P59768 71 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 MAT1AQ00266 395 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TAP2Q03519 686 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RGNQ15493 299 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 LINC00696Q6ZRV3 163 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF534Q76KX8 674 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 DPPA2Q7Z7J5 298 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 NRMQ8IXM6 262 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM178AQ8NBL3 297 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC41A3Q96GZ6 507 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 CMTM3Q96MX0 182 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RDH12Q96NR8 316 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 PHOX2BQ99453 314 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TAS2R10Q9NYW0 307 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 CBLCQ9ULV8 474 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF806P0C7X5 589 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 PTPN6P29350 595 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 NOVA1P51513 510 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZXDBP98169 803 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZP2Q05996 745 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 DCST2Q5T1A1 773 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SECISBP2Q96T21 854 aaKnown RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 PFDN5Q99471 154 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM121BQ9BXQ6 578 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ITPAQ9BY32 194 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ACPTQ9BZG2 426 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SCPEP1Q9HB40 452 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 OBP2BQ9NPH6 170 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 UBQLN4Q9NRR5 601 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SPHK1Q9NYA1 384 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 MEMO1Q9Y316 297 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TRIOBPQ9H2D6 2365 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TRAV20A0A0B4J274 112 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 H0Y8X5 98 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RAD51DO75771 328 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RLN2P04090 185 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 IMPA1P29218 277 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SSR4P51571 173 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 HERV-K104P61576 105 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 PTPRRQ15256 657 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 AKIRIN2Q53H80 203 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ALG10Q5BKT4 473 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TNFAIP8L3Q5GJ75 292 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 GARNL3Q5VVW2 1013 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TSSK4Q6SA08 328 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 NAGSQ8N159 534 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF548Q8NEK5 533 aaPredicted RBP6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 OR52E2Q8NGJ4 325 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 TESCQ96BS2 214 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF416Q9BWM5 594 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC6A16Q9GZN6 736 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms