RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C6orf132Q5T0Z8 1188 aa12.35□□□□□ -0.43
TNC-212ENST00000542877 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
TNC-212ENST00000542877 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
TNC-212ENST00000542877 ZNF100Q8IYN0 542 aa12.35□□□□□ -0.43
TNC-212ENST00000542877 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
TNC-212ENST00000542877 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
TNC-212ENST00000542877 C7orf72A4D263 438 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SRPX2O60687 465 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 MGAT3Q09327 533 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 FAM69BQ5VUD6 431 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 METAP1DQ6UB28 335 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 COMTD1Q86VU5 262 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 OR2M2Q96R28 347 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 ALOXE3Q9BYJ1 711 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 CSNK1G1Q9HCP0 422 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 GGT3PA6NGU5 568 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 OR2T1O43869 369 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 ZNF888P0CJ79 500 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 RABIFP47224 123 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 DAP3P51398 398 aaKnown RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 PTPRRQ15256 657 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 PGGHGQ32M88 737 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 BCL7AQ4VC05 210 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 MYADMQ96S97 322 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 DCDC2BA2VCK2 349 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 FRS3O43559 492 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 IFNA10P01566 189 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 TP53P04637 393 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 RAB3AP20336 220 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 ADRA1AP35348 466 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 TLE3Q04726 772 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 GPR50Q13585 617 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 PIP5KL1Q5T9C9 394 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 CLEC14AQ86T13 490 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 ARRDC2Q8TBH0 407 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 DIO2Q92813 273 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 LPAR4Q99677 370 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 OR52D1Q9H346 318 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 IL37Q9NZH6 218 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 REV1Q9UBZ9 1251 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 CD300AQ9UGN4 299 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 SLC35A3Q9Y2D2 325 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 FAM171A2A8MVW0 826 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 MPIG6BO95866 241 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 KNG1P01042 644 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 RBMS1P29558 406 aaKnown RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 CCR7P32248 378 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 GLO1Q04760 184 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 MLC1Q15049 377 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 C20orf27Q9GZN8 174 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 BIN3Q9NQY0 253 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
TNC-212ENST00000542877 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
TNC-212ENST00000542877 LOC102723532A0A0G2JNH3 316 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 CIB4A0PJX0 185 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 A6NLC8 198 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 GJE1A6NN92 205 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 FBXO45P0C2W1 286 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 ITGB7P26010 798 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 FASLGP48023 281 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 KIR2DS3Q14952 304 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 DCST2Q5T1A1 773 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 CPXM2Q8N436 756 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.43
TNC-212ENST00000542877 OR7G1Q8NGA0 311 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 ASB11Q8WXH4 323 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 FOXRED1Q96CU9 486 aaPredicted RBP12.33□□□□□ -0.43
TNC-212ENST00000542877 UBXN10Q96LJ8 280 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 INTS14Q96SY0 518 aa12.33□□□□□ -0.43
TNC-212ENST00000542877 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.43
TNC-212ENST00000542877 SMAD6O43541 496 aaKnown RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 HTR3BO95264 441 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 CTSL3PQ5NE16 218 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 TMEM151BQ8IW70 566 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 TMEM102Q8N9M5 508 aaPredicted RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 KLF16Q9BXK1 252 aaPredicted RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 NOX3Q9HBY0 568 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 ARPC4-TTLL3A0A0A6YYG9 625 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 MMP2P08253 660 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 ARSBP15848 533 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 AOAHP28039 575 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
TNC-212ENST00000542877 LRRC56Q8IYG6 542 aaPredicted RBP12.33□□□□□ -0.44
TNC-212ENST00000542877 METTL4Q8N3J2 472 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms