RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ERVMER34-1Q9H9K5 563 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 ISG20L2Q9H9L3 353 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 CNIH4Q9P003 139 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 BDP1A6H8Y1 2624 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 IGLV3-16A0A075B6K0 115 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 OR52A4PA6NMU1 304 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 POM121CA8CG34 1229 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 C5orf58C9J3I9 102 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 FRS3O43559 492 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 SLC2A10O95528 541 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 DCNP07585 359 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 AK4P27144 223 aaPredicted RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 GIFP27352 417 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 MTNR1AP48039 350 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 HSPB3Q12988 150 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 RIN1Q13671 783 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 PDE7AQ13946 482 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 SYPL1Q16563 259 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 SYTL3Q4VX76 610 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 FAM71E1Q6IPT2 247 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 FAM122CQ6P4D5 195 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 MTSS1LQ765P7 747 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 SAMD12Q8N8I0 201 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 RBPMSQ93062 196 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 TSACCQ96A04 125 aaPredicted RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 RFT1Q96AA3 541 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 PDXPQ96GD0 296 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 CXorf58Q96LI9 332 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 SECISBP2Q96T21 854 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 ZNF649Q9BS31 505 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 QRSL1Q9H0R6 528 aaKnown RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 XKR8Q9H6D3 395 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 EMC7Q9NPA0 242 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
THBS3-211ENST00000541990 RDH8Q9NYR8 311 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 KCNMB2Q9Y691 235 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 PLXND1Q9Y4D7 1925 aa8.53□□□□□ -1.04
THBS3-211ENST00000541990 ASPMQ8IZT6 3477 aa8.52□□□□□ -1.04
THBS3-211ENST00000541990 A0A1W2PPC1 479 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 PIPSLA2A3N6 862 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 LGALS8O00214 317 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 GPR171O14626 319 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 PDGFBP01127 241 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 HPXP02790 462 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 MPC1LP0DKB6 136 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 PEPDP12955 493 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 DRD5P21918 477 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 ADPRHP54922 357 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 AP1S2P56377 157 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 BTG1P62324 171 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SIM1P81133 766 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 BHLHB9Q6PI77 547 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 TSSK4Q6SA08 328 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 METAP1DQ6UB28 335 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 ARSKQ6UWY0 536 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 WASH2PQ6VEQ5 465 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SLCO4C1Q6ZQN7 724 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SZRD1Q7Z422 152 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 TRAM1L1Q8N609 369 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 OR52H1Q8NGJ2 320 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 OR6T1Q8NGN1 323 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 NUP210Q8TEM1 1887 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 PPP1R16AQ96I34 528 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 PHF7Q9BWX1 381 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 LIN7BQ9HAP6 207 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 BRF2Q9HAW0 419 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 DLL4Q9NR61 685 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 UBQLN2Q9UHD9 624 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 A0A1W2PPL8 197 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 TSPAN11A1L157 253 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 NPC1O15118 1278 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 PRODHO43272 600 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SH3BP5O60239 455 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 UGDHO60701 494 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 RNGTTO60942 597 aaKnown RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 TCRBP04435 133 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 ANKRD34CP0C6C1 535 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 GABRG2P18507 467 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 DNASE1P24855 282 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SHC1P29353 583 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 THBS2P35442 1172 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 CDK5Q00535 292 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 COL28A1Q2UY09 1125 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 SLC30A6Q6NXT4 461 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 OR5AR1Q8NGP9 310 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 ST8SIA4Q92187 359 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 C12orf66Q96MD2 445 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 TBX5Q99593 518 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 NLNQ9BYT8 704 aa8.52□□□□□ -1.05
THBS3-211ENST00000541990 C6orf106Q9H6K1 298 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 RANBP3Q9H6Z4 567 aaPredicted RBP8.52□□□□□ -1.05
THBS3-211ENST00000541990 FGF20Q9NP95 211 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms