RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ATP4BP51164 291 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF41P51814 821 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 B3GALT5-AS1P59052 145 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 HPCAP84074 193 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 FUT5Q11128 374 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ART3Q13508 389 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 SQLEQ14534 574 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CDSNQ15517 529 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF630Q2M218 657 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 NDUFAF6Q330K2 333 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 GTDC1Q4AE62 458 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ACSF3Q4G176 576 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 GPAT3Q53EU6 434 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 COX20Q5RI15 118 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 PDZK1Q5T2W1 519 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 HEPHL1Q6MZM0 1159 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CCDC71Q8IV32 467 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 FUNDC1Q8IVP5 155 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 B4GALNT2Q8NHY0 566 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 STON2Q8WXE9 905 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 GTF2H4Q92759 462 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 SPDL1Q96EA4 605 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 AURKBQ96GD4 344 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-215ENST00000540904 TRIB1Q96RU8 372 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 PIGQQ9BRB3 760 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 TMEM120AQ9BXJ8 343 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 NMUR2Q9GZQ4 415 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF350Q9GZX5 532 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 RABEP2Q9H5N1 569 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 RNF6Q9Y252 685 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 CARD8Q9Y2G2 431 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 WDR45Q9Y484 360 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 DTNAQ9Y4J8 743 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 LRRK2Q5S007 2527 aa8.36□□□□□ -1.07
SNHG1-215ENST00000540904 NCKAP5O14513 1909 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CENPVL1A0A0U1RR11 272 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 OR2M5A3KFT3 312 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SERINC4A6NH21 518 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 FAM47E-STBD1D6RA91 191 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 NPIPB9F8W1W9 429 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 H0Y3Z8 333 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 H3BML4 177 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 OIP5O43482 229 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 UGT2B17O75795 530 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CYP7B1O75881 506 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 H6PDO95479 791 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CLDN14O95500 239 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 NUDT14O95848 222 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 EPPINO95925 133 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ZCCHC18P0CG32 403 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 NR2F1P10589 423 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 UBL4AP11441 157 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ETFAP13804 333 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CD1EP15812 388 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 POU3F2P20265 443 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CAPN3P20807 821 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 MSX1P28360 303 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 HTR1EP28566 365 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CHRNB4P30926 498 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ADH7P40394 386 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 MDH1P40925 334 aaKnown RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 LHX2P50458 406 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 IRX1P78414 480 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF117Q03924 483 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.077e-51■■■■■ 64.8
SNHG1-215ENST00000540904 ZNF141Q15928 474 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SYPL1Q16563 259 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CBLN3Q6UW01 205 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 MTERF4Q7Z6M4 381 aaKnown RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 HMGN2P46Q86SG4 172 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 UBQLNLQ8IYU4 475 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 TMCO5AQ8N6Q1 288 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ASB5Q8WWX0 329 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 SMPDL3BQ92485 455 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 TUBA1CQ9BQE3 449 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 PAIP1Q9H074 479 aaKnown RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 CCDC134Q9H6E4 229 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 TPT1P8Q9HAU6 139 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 POLE3Q9NRF9 147 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 MED17Q9NVC6 651 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 KCNE5Q9UJ90 142 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF337Q9Y3M9 751 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 KLF2Q9Y5W3 355 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF407Q9C0G0 2248 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 MYO7BQ6PIF6 2116 aa8.35□□□□□ -1.07
SNHG1-215ENST00000540904 A0A087WZY1 265 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 A0A096LPI6 279 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 A0A0G2JNJ9 132 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 FAM90A27PA6NNH2 459 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms