RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MISPQ8IVT2 679 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 TRIML2Q8N7C3 387 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 LILRB4Q8NHJ6 448 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 RFWD2Q8NHY2 731 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 ZPLD1Q8TCW7 415 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 CA5BP1Q8WTZ4 195 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 XAGE5Q8WWM1 108 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 ASB5Q8WWX0 329 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 SH3YL1Q96HL8 342 aaPredicted RBP15.28■□□□□ 0.04
CD9-209ENST00000540891 TUBA1CQ9BQE3 449 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 UCK2Q9BZX2 261 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 HOXD1Q9GZZ0 328 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 EXD2Q9NVH0 621 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 CD8B2A6NJW9 211 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 SHISA8B8ZZ34 492 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 HMGN4O00479 90 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 TNFRSF21O75509 655 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 STX11O75558 287 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 MSX1P28360 303 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 CEACAM8P31997 349 aaPredicted RBP15.27■□□□□ 0.04
CD9-209ENST00000540891 KHKP50053 298 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 MVDP53602 400 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 CLDN15P56746 228 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 ZNF117Q03924 483 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 SRYQ05066 204 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 NDUFAF6Q330K2 333 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 GLYR1Q49A26 553 aaPredicted RBP15.27■□□□□ 0.04
CD9-209ENST00000540891 COX20Q5RI15 118 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 AP1ARQ63HQ0 302 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 TYW3Q6IPR3 259 aaKnown RBP15.27■□□□□ 0.04
CD9-209ENST00000540891 CBLN3Q6UW01 205 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 PLXDC2Q6UX71 529 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 MTERF4Q7Z6M4 381 aaKnown RBP15.27■□□□□ 0.04
CD9-209ENST00000540891 LACC1Q8IV20 430 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 TNIP2Q8NFZ5 429 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 OR10Q1Q8NGQ4 319 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 B4GALNT2Q8NHY0 566 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 PNPT1Q8TCS8 783 aaKnown RBP15.27■□□□□ 0.04
CD9-209ENST00000540891 PHOSPHO1Q8TCT1 267 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 ZFP90Q8TF47 636 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 ROPN1LQ96C74 230 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 TRIB1Q96RU8 372 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 NMUR2Q9GZQ4 415 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 SLC52A3Q9NQ40 469 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 MKLN1Q9UL63 735 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 VDAC3Q9Y277 283 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 ZNF337Q9Y3M9 751 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 DTNAQ9Y4J8 743 aa15.27■□□□□ 0.04
CD9-209ENST00000540891 ARHGAP21Q5T5U3 1957 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 NKX2-6A6NCS4 301 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 MBD3L4A6NDZ8 208 aaPredicted RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 MBD3L3A6NE82 208 aaPredicted RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 MBD3L5A6NJ08 208 aaPredicted RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 FAM90A27PA6NNH2 459 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 H0Y3Z8 333 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 HCRTR2O43614 444 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 KIAA0513O60268 411 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 UGT2B17O75795 530 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 AGR2O95994 175 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 GUSBP08236 651 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ZCCHC18P0CG32 403 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 HOXB9P17482 250 aaPredicted RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 PSMA4P25789 261 aaKnown RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 TIMP3P35625 211 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 STX1BP61266 288 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 TFF3Q07654 80 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 RCAN2Q14206 197 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 GPR68Q15743 365 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ZNF141Q15928 474 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 MAPK14Q16539 360 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 BCL2A1Q16548 175 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 PLPPR5Q32ZL2 321 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 PDZK1Q5T2W1 519 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 POMZP3Q6PJE2 187 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 SLC2A7Q6PXP3 512 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 FRRS1Q6ZNA5 592 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 C16orf62Q7Z3J2 963 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ZNF527Q8NB42 609 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 MBD3L2Q8NHZ7 208 aaPredicted RBP15.26■□□□□ 0.03
CD9-209ENST00000540891 GTF2H4Q92759 462 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ZNF524Q96C55 264 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 PIGQQ9BRB3 760 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 SAP130Q9H0E3 1048 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ZNF385DQ9H6B1 395 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 HHATLQ9HCP6 504 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 NPHS2Q9NP85 383 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 MED17Q9NVC6 651 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 DCTN4Q9UJW0 460 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 ICAM5Q9UMF0 924 aa15.26■□□□□ 0.03
CD9-209ENST00000540891 CLCA1A8K7I4 914 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 H0YC42 278 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 PEPDP12955 493 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 ATP4BP51164 291 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 SUCLG1P53597 346 aaKnown RBP15.25■□□□□ 0.03
CD9-209ENST00000540891 TPD52P55327 224 aaPredicted RBP15.25■□□□□ 0.03
CD9-209ENST00000540891 MAPK11Q15759 364 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 ATAD3BQ5T9A4 648 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 BLOC1S3Q6QNY0 202 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 ZNF614Q8N883 585 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms