RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 FAHD1Q6P587 224 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 TIPARPQ7Z3E1 657 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 TFAP2CQ92754 450 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC35B4Q969S0 331 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 MESP1Q9BRJ9 268 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 POLR2J2Q9GZM3 115 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 POLR2J3Q9H1A7 115 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 NMNAT1Q9HAN9 279 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 RLIMQ9NVW2 624 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 TMEFF2Q9UIK5 374 aaPredicted RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 A0A1W2PQ72 361 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 A0A1W2PRQ8 180 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 CLDN24A6NM45 220 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 AP3D1O14617 1153 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 HS6ST1O60243 411 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 TPST2O60704 377 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 CCNB2O95067 398 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 SNAP29O95721 258 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 IFNA8P32881 189 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 NR0B1P51843 470 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 CHN2P52757 468 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 RAD23AP54725 363 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 PIN1Q13526 163 aaPredicted RBP13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 DGCR6Q14129 220 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 LAPTM4AQ15012 233 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 PDK3Q15120 406 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC36A3Q495N2 470 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 OFCC1Q8IZS5 231 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC34A3Q8N130 599 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 DHRSXQ8N5I4 330 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 DIO2Q92813 273 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 C8orf44Q96CB5 159 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 ALPK1Q96QP1 1244 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 LMF1Q96S06 567 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 FOXJ2Q9P0K8 574 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 RHCGQ9UBD6 479 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
CYB561A3-216ENST00000540755 H0YAE9 185 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 FAAHO00519 579 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 FRS3O43559 492 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 TSPAN2O60636 221 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 FMO6PO60774 539 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 OXSR1O95747 527 aaPredicted RBP13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 LYNP07948 512 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ANXA8P13928 327 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 IGFBP5P24593 272 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 CAPGP40121 348 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 DAPP51397 102 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF136P52737 540 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 DCST1Q5T197 706 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ANKRD34AQ69YU3 496 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 TSPYL5Q86VY4 417 aaPredicted RBP13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ESX1Q8N693 406 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ATG16L2Q8NAA4 619 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 OR5L2Q8NGL0 311 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 CT55Q8WUE5 264 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 MCHR1Q99705 422 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 FUZQ9BT04 418 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 FAM117AQ9C073 453 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF700Q9H0M5 742 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 PRORYQ9H606 182 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 KIF17Q9P2E2 1029 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 TMCC3Q9ULS5 477 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF462Q96JM2 2506 aa13.11□□□□□ -0.31
CYB561A3-216ENST00000540755 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TRBV4-1A0A0J9YWV2 114 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 PRKNO60260 465 aaPredicted RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 OR5F1O95221 314 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 COX6A1P12074 109 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 CDH2P19022 906 aaPredicted RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TCN2P20062 427 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 FUT4P22083 530 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 MMP11P24347 488 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 KRT20P35900 424 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ADH7P40394 386 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 PNLIPRP2P54317 469 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TAS2R41P59536 307 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms