RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
NPC1-202ENST00000540608 TPRA1Q86W33 373 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 FAM109AQ8N4B1 249 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 C12orf76Q8N812 135 aaPredicted RBP11.45□□□□□ -0.58
NPC1-202ENST00000540608 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 ZFPM2Q8WW38 1151 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 NACC2Q96BF6 587 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 SARGQ9BW04 601 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 TRIM36Q9NQ86 728 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
NPC1-202ENST00000540608 TMA7Q9Y2S6 64 aaKnown RBP11.45□□□□□ -0.58
NPC1-202ENST00000540608 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 FABP7O15540 132 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 RFPL3O75679 317 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 DHFRP00374 187 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 FCN2Q15485 313 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 TRAM1Q15629 374 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 LTB4RQ15722 352 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 IL20RBQ6UXL0 311 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 ZNF782Q6ZMW2 699 aaPredicted RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 GPR135Q8IZ08 494 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 TMEM99Q8N816 258 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 SAMD12Q8N8I0 201 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 SLC16A11Q8NCK7 471 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 MKRN2Q9H000 416 aaKnown RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 MED28Q9H204 178 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 OR52D1Q9H346 318 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 PIGUQ9H490 435 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 MBNL1Q9NR56 388 aaKnown RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 INPP5EQ9NRR6 644 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 STMN3Q9NZ72 180 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 NTMQ9P121 344 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 TEKT2Q9UIF3 430 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 ING4Q9UNL4 249 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 RASD1Q9Y272 281 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 OR1A2Q9Y585 309 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 CACNG2Q9Y698 323 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 ZC3H12DA2A288 527 aaKnown RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 C7orf66A4D0T2 115 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 PLPP2O43688 288 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 NOS1APO75052 506 aaPredicted RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 CRYZL1O95825 349 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 AGR2O95994 175 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 BTCP35070 178 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 KRT33BQ14525 404 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 BCL2L15Q5TBC7 163 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 ANKRD54Q6NXT1 300 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 SFXN4Q6P4A7 337 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 NRROSQ86YC3 692 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 LRRC17Q8N6Y2 441 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 MFSD9Q8NBP5 474 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 OR2L3Q8NG85 312 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 SUSD6Q92537 303 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 CDS1Q92903 461 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 ARMC5Q96C12 935 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 TBX5Q99593 518 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 PRSS27Q9BQR3 290 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 C6orf106Q9H6K1 298 aaPredicted RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 MED20Q9H944 212 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 B3GNT2Q9NY97 397 aa11.44□□□□□ -0.58
NPC1-202ENST00000540608 APOBEC3BQ9UH17 382 aaKnown RBP11.44□□□□□ -0.58
NPC1-202ENST00000540608 TBC1D3KA0A087X1G2 549 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 TBC1D3BA6NDS4 549 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 TBC1D3FA6NER0 549 aaPredicted RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 BHLHE40O14503 412 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 EEF1E1O43324 174 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 SOX30O94993 753 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 MT-ND5P03915 603 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 ZNF136P52737 540 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 FXYD6P3P58550 94 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 STXBP1P61764 594 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 AGERQ15109 404 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 NTRK2Q16620 822 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 FAM78AQ5JUQ0 283 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 TBC1D3GQ6DHY5 549 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 PYHIN1Q6K0P9 492 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 MFSD12Q6NUT3 480 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 ZNF836Q6ZNA1 936 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 FBXL6Q8N531 539 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 DTX3Q8N9I9 347 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 OR52E1Q8NGJ3 308 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 ABHD4Q8TB40 342 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 SCMH1Q96GD3 660 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 HS6ST2Q96MM7 605 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 GPR137Q96N19 417 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 ABHD1Q96SE0 405 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 CD180Q99467 661 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPC1-202ENST00000540608 GHITMQ9H3K2 345 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 CACYBPQ9HB71 228 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 PRSS16Q9NQE7 514 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 LYARQ9NX58 379 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 SIDT1Q9NXL6 827 aaKnown RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 ZNF223Q9UK11 482 aaPredicted RBP11.43□□□□□ -0.58
NPC1-202ENST00000540608 WDR45Q9Y484 360 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
NPC1-202ENST00000540608 REV3LO60673 3130 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms