RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	EMX2	Q04743	252 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	IFFO1	Q0D2I5	559 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PON3	Q15166	354 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	LSM12	Q3MHD2	195 aa	Known RBP	11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KLHL26	Q53HC5	615 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	TNFAIP8L3	Q5GJ75	292 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	IL23R	Q5VWK5	629 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	AP1AR	Q63HQ0	302 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FAM214B	Q7L5A3	538 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	WDR75	Q8IWA0	830 aa	Known RBP	11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	POC1B	Q8TC44	478 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SFXN5	Q8TD22	340 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MOAP1	Q96BY2	351 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MARK4	Q96L34	752 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NPAS1	Q99742	590 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	YIPF4	Q9BSR8	244 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ACTRT3	Q9BYD9	372 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	HOXD1	Q9GZZ0	328 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CXorf36	Q9H7Y0	433 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MED17	Q9NVC6	651 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ATAD3A	Q9NVI7	634 aa		11.77	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SHISA8	B8ZZ34	492 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SCD	O00767	359 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	BIRC5	O15392	142 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SIAH2	O43255	324 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SEC14L5	O43304	696 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	AQP8	O94778	261 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SNUPN	O95149	360 aa	Known RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DHRS4L1	P0CG22	281 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FCGR2A	P12318	317 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CD99	P14209	185 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CRYGS	P22914	178 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ADH6	P28332	368 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	UGT2B10	P36537	528 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CCT3	P49368	545 aa	Known RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CLDN8	P56748	225 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	POU6F2	P78424	691 aa	Predicted RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	LASP1	Q14847	261 aa	Known RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CD226	Q15762	336 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DEFB113	Q30KQ7	82 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ESPNL	Q6ZVH7	1005 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	GALNT10	Q86SR1	603 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	COX18	Q8N8Q8	333 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CNEP1R1	Q8N9A8	125 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OR56A1	Q8NGH5	318 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NUDT8	Q8WV74	236 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CDS1	Q92903	461 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	WFIKKN1	Q96NZ8	548 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	PRPF18	Q99633	342 aa	Known RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KLHDC3	Q9BQ90	382 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NEUROD4	Q9HD90	331 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DLL4	Q9NR61	685 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	GLRX2	Q9NS18	164 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	HAO1	Q9UJM8	370 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ICAM5	Q9UMF0	924 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	VDAC3	Q9Y277	283 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ACTL7B	Q9Y614	415 aa		11.76	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FREM1	Q5H8C1	2179 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DEFB108A	A8MXU0	73 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ETV2	O00321	342 aa	Predicted RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DNAJA2	O60884	412 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SS18L1	O75177	396 aa	Predicted RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NTN1	O95631	604 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	GUSB	P08236	651 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KRT16	P08779	473 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	G6PD	P11413	515 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FOSL1	P15407	271 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CD53	P19397	219 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KLK2	P20151	261 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	EFNA1	P20827	205 aa	Predicted RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	HOXC12	P31275	282 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CCKAR	P32238	428 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	EIF1	P41567	113 aa	Known RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SLC6A8	P48029	635 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ADAM8	P78325	824 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	MAD2L1	Q13257	205 aa	Predicted RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	CCNJ	Q5T5M9	372 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	NUDCD3	Q8IVD9	361 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	LRRC34	Q8IZ02	419 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	KRTCAP2	Q8N6L1	136 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	ZNF610	Q8N9Z0	462 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FNDC5	Q8NAU1	212 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OR8J2	Q8NGG1	315 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OR6K3	Q8NGY3	331 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OR10D3	Q8NH80	312 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	B4GALNT2	Q8NHY0	566 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	FBXO30	Q8TB52	745 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	AGR3	Q8TD06	166 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	SLC39A3	Q9BRY0	314 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	C1orf50	Q9BV19	199 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DUSP26	Q9BV47	211 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	EIF3L	Q9Y262	564 aa	Known RBP	11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475	DSCAM	O60469	2012 aa		11.75	□□□□□ -0.53
SEMA4D-223	ENST00000540475		A0A0J9YW62	118 aa		11.74	□□□□□ -0.53
SEMA4D-223	ENST00000540475	C16orf97	H3BN30	126 aa		11.74	□□□□□ -0.53

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