RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CYP4Z2PQ8N1L4 340 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GATSQ8NAP1 163 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF527Q8NB42 609 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CANT1Q8WVQ1 401 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OIT3Q8WWZ8 545 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PYURFQ96I23 114 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HSH2DQ96JZ2 352 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DOHHQ9BU89 302 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TRIM45Q9H8W5 580 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SH2D2AQ9NP31 389 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RLIMQ9NVW2 624 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ALG1L2C9J202 215 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 TP53I11O14683 189 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ITGB2P05107 769 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ELF3P78545 371 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 MRPL2Q5T653 305 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FNDC7Q5VTL7 733 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RTL4Q6ZR62 310 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FKBP9P1Q75LS8 142 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PAQR8Q8TEZ7 354 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 LZICQ8WZA0 190 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SGCZQ96LD1 299 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SEPHS2Q99611 448 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 WFDC6Q9BQY6 131 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 UTP23Q9BRU9 249 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 TBL1XR1Q9BZK7 514 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 BAG5Q9UL15 447 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ABCG2Q9UNQ0 655 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SPTA1P02549 2419 aa17.32■□□□□ 0.36
TNFRSF1A-213ENST00000540022 A0A1W2PQD3 144 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 DHRS12A0PJE2 317 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PRAMEF25A6NGN4 478 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 C17orf51A8MQB3 221 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SCO2O43819 266 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 LGI1O95970 557 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CCL3P10147 92 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CASRP41180 1078 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PTGDSP41222 190 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CASP3P42574 277 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RNF220Q5VTB9 566 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 BORAQ6PGQ7 559 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GOLM1Q8NBJ4 401 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RSRC1Q96IZ7 334 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SIGLEC12Q96PQ1 595 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SECISBP2Q96T21 854 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GALNT9Q9HCQ5 603 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 LRFN1Q9P244 771 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CNOT11Q9UKZ1 510 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SH3GLB1Q9Y371 365 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CDHR4A6H8M9 788 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SYT5O00445 386 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NEURL1O76050 574 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ANGPTL1O95841 491 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 UMPSP11172 480 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ADH7P40394 386 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OR1E2P47887 323 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NDUFAF6Q330K2 333 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PRAMEF20Q5VT98 475 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC22A10Q63ZE4 541 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 TMEM81Q6P7N7 255 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 IGFL2Q6UWQ7 119 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CMIPQ8IY22 773 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ZNF843Q8N446 348 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OR4D11Q8NGI4 311 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PHOSPHO1Q8TCT1 267 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CNOT9Q92600 299 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PROX1Q92786 737 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RNF32Q9H0A6 362 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 METTL7AQ9H8H3 244 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 KLRF1Q9NZS2 232 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ANAPC2Q9UJX6 822 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 MED13Q9UHV7 2174 aa17.31■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OR5H15A6NDH6 313 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 M0R3H8 397 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FRS3O43559 492 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NDUFB5O43674 189 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CSTAP01040 98 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SEMG1P04279 462 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GPIP06744 558 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GAS1P54826 345 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RPP38P78345 283 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OR1C1Q15619 314 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NRF1Q16656 503 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 IFI44LQ53G44 452 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 EIPR1Q53HC9 387 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 LACC1Q8IV20 430 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 EXD3Q8N9H8 876 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 HAS2Q92819 552 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLCO4A1Q96BD0 722 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC47A1Q96FL8 570 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SMAD5Q99717 465 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ARHGDIGQ99819 225 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 UGT2B28Q9BY64 529 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PROK2Q9HC23 129 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 DNAJB12Q9NXW2 375 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms