RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 P3H4Q92791 437 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ERGIC1Q969X5 290 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC25A36Q96CQ1 311 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SH3YL1Q96HL8 342 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 AKR1E2Q96JD6 320 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF778Q96MU6 729 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CMKLR1Q99788 373 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 C9orf16Q9BUW7 83 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FUNDC2Q9BWH2 189 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ANGPTL4Q9BY76 406 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PANK2Q9BZ23 570 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM124BQ9H5Z6 455 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DHX33Q9H6R0 707 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MOV10Q9HCE1 1003 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MED4Q9NPJ6 270 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF302Q9NR11 478 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 GKN1Q9NS71 199 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 TXLNGQ9NUQ3 528 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC39A1Q9NY26 324 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 RBAKQ9NYW8 714 aaPredicted RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 NPAP1Q9NZP6 1156 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DKK2Q9UBU2 259 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 LRWD1Q9UFC0 647 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 PITPNC1Q9UKF7 332 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 UTS2RQ9UKP6 389 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 ABCG2Q9UNQ0 655 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 RBMX2Q9Y388 322 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 RIPK3Q9Y572 518 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 DDX60Q8IY21 1712 aaKnown RBP3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 SALL1Q9NSC2 1324 aa3.44□□□□□ -1.86
AC055720.1-201ENST00000539552 MGAMO43451 1857 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 FLNAP21333 2647 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 C1orf232A0A0U1RR37 186 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 A0A1W2PRB8 838 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 TCRBV5S1A1TA0A578 114 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SLC22A23A1A5C7 686 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 HYKKA2RU49 373 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 OR2M5A3KFT3 312 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF840PA6NDX5 716 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 A6NNC1 897 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SERPINE3A8MV23 424 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 A8MXQ7 604 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 C17orf105B2RV13 164 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 P2RY10O00398 339 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 RS1O15537 224 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 HSPA12AO43301 675 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 TRAPPC3O43617 180 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 NDUFS6O75380 124 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 RBBP9O75884 186 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PDE5AO76074 875 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 ZBTB11O95625 1053 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SERPIND1P05546 499 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 RPSAP08865 295 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 ACADSP16219 412 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 NCK1P16333 377 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 NAGAP17050 411 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 GOT1P17174 413 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 TCN1P20061 433 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 GPD1P21695 349 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 STOMP27105 288 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 OXTRP30559 389 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 HOXA7P31268 230 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 AVPR1AP37288 418 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 MPLP40238 635 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 EIF2S3P41091 472 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CRYBB2P43320 205 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 OR3A3P47888 321 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 ARRB1P49407 418 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 COMPP49747 757 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SP3Q02447 781 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 KDSRQ06136 332 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 GABPAQ06546 454 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PPIDQ08752 370 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 FOXI1Q12951 378 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CALCOCO2Q13137 446 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CRMP1Q14194 572 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PIGHQ14442 188 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 ITIH4Q14624 930 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SPHARQ15513 63 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 VAMP3Q15836 100 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PSG3Q16557 428 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CA9Q16790 459 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 AWAT1Q58HT5 328 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CEP78Q5JTW2 689 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 LIPJQ5W064 366 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 OR4F3Q6IEY1 312 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 KCTD18Q6PI47 426 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 DOK6Q6PKX4 331 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 TMIGD1Q6UXZ0 262 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CYP4V2Q6ZWL3 525 aaPredicted RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 SATL1Q86VE3 508 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PARGQ86W56 976 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 PLCZ1Q86YW0 608 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CNGA4Q8IV77 575 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 FAM114A1Q8IWE2 563 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 CHERPQ8IWX8 916 aaKnown RBP3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 LRRC34Q8IZ02 419 aa3.43□□□□□ -1.86
AC055720.1-201ENST00000539552 FBXL16Q8N461 479 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms