RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 C5orf34Q96MH7 638 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TRNT1Q96Q11 434 aaKnown RBP11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 UBQLN3Q9H347 655 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 PIF1Q9H611 641 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 GORASP2Q9H8Y8 452 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
CCDC42-202ENST00000539522 SNX13Q9Y5W8 968 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM229AB2RXF0 380 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ALG1L2C9J202 215 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 TP53I11O14683 189 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 SNPHO15079 494 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 SCO2O43819 266 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ADAM11O75078 769 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ATP6V1G2O95670 118 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 EPPINO95925 133 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 P04436 131 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 BCHEP06276 602 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 DCTP40126 519 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ANXA11P50995 505 aaKnown RBP11.85□□□□□ -0.51
CCDC42-202ENST00000539522 FOXK1P85037 733 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 GPR68Q15743 365 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ZNF141Q15928 474 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 CYP51A1Q16850 503 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 OR5M10Q6IEU7 315 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ZFP1Q6P2D0 407 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 LRRC74BQ6ZQY2 392 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 FGD2Q7Z6J4 655 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 FADS6Q8N9I5 356 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM178AQ8NBL3 297 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 BHLHE22Q8NFJ8 381 aaPredicted RBP11.85□□□□□ -0.51
CCDC42-202ENST00000539522 NFKBIDQ8NI38 313 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 SLC26A7Q8TE54 656 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 GNRHR2Q96P88 292 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 NPAS1Q99742 590 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 TREX2Q9BQ50 279 aaPredicted RBP11.85□□□□□ -0.51
CCDC42-202ENST00000539522 FAM173AQ9BQD7 235 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM38AQ9H6F2 299 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 THUMPD1Q9NXG2 353 aaKnown RBP11.85□□□□□ -0.51
CCDC42-202ENST00000539522 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 MAGEL2Q9UJ55 1249 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 FBXL2Q9UKC9 423 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 WIF1Q9Y5W5 379 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 HEATR5AQ86XA9 2040 aa11.85□□□□□ -0.51
CCDC42-202ENST00000539522 IGLV3-32A0A0A0MS00 114 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ARPC2O15144 300 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 STX11O75558 287 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 RASAL1O95294 804 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 AGR2O95994 175 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 AK1P00568 194 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 UMPSP11172 480 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 GGT1P19440 569 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ATP12AP54707 1039 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 PCBP3P57721 371 aaKnown RBP11.84□□□□□ -0.51
CCDC42-202ENST00000539522 RBBP4Q09028 425 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 SNTA1Q13424 505 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 VEZF1Q14119 521 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 FLYWCH1Q4VC44 716 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 GPAT3Q53EU6 434 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 CMPK2Q5EBM0 449 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 MTX3Q5HYI7 312 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 PDZK1Q5T2W1 519 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 GCNT6Q5T4J0 391 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 FBXW10Q5XX13 1052 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 SLC30A6Q6NXT4 461 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 C16orf62Q7Z3J2 963 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 SPPL2CQ8IUH8 684 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ZNF619Q8N2I2 560 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM251Q8N6I4 163 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 GATSQ8NAP1 163 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 HIPK4Q8NE63 616 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 OR52E4Q8NGH9 312 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 TMCO6Q96DC7 493 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 DUS3LQ96G46 650 aaKnown RBP11.84□□□□□ -0.51
CCDC42-202ENST00000539522 SLX1AQ9BQ83 275 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 WFDC6Q9BQY6 131 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 G6PC3Q9BUM1 346 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 TSPAN10Q9H1Z9 355 aaPredicted RBP11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ZNF703Q9H7S9 590 aaPredicted RBP11.84□□□□□ -0.51
CCDC42-202ENST00000539522 METTL7AQ9H8H3 244 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 BCL2L10Q9HD36 194 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 UBQLN4Q9NRR5 601 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 EXD2Q9NVH0 621 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ANAPC2Q9UJX6 822 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 ABCG2Q9UNQ0 655 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 LIPT1Q9Y234 373 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 WDR45Q9Y484 360 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 PCDHGB3Q9Y5G1 929 aa11.84□□□□□ -0.51
CCDC42-202ENST00000539522 LIPGQ9Y5X9 500 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms