RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CD180Q99467 661 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 ORAI3Q9BRQ5 295 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 ZNF649Q9BS31 505 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 GPR174Q9BXC1 333 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 OR52D1Q9H346 318 aa16.62■□□□□ 0.25
GNE-204ENST00000539208 H2AFY2Q9P0M6 372 aaPredicted RBP16.62■□□□□ 0.25
GNE-204ENST00000539208 KCNK2O95069 426 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 CDRT1O95170 752 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 GAAP10253 952 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 TYRP1P17643 537 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 DEFA1P59665 94 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 DEFA3P59666 94 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 C1orf61Q13536 156 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 GRAMD2AQ8IUY3 354 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 MCATQ8IVS2 390 aaKnown RBP16.61■□□□□ 0.25
GNE-204ENST00000539208 GID4Q8IVV7 300 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 OR52R1Q8NGF1 315 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 OR52N1Q8NH53 320 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 DPH1Q9BZG8 443 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 BLACEA4D250 179 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 J3QRE1 110 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 OR10H2O60403 315 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 SRPX2O60687 465 aaPredicted RBP16.61■□□□□ 0.25
GNE-204ENST00000539208 MSL3P1P0C860 447 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 MAKP20794 623 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 TBXA2RP21731 343 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 CTBP2P56545 445 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 FXYD6P3P58550 94 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 RPS25P62851 125 aaKnown RBP16.61■□□□□ 0.25
GNE-204ENST00000539208 PSPHP78330 225 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 ZNF155Q12901 538 aaPredicted RBP16.61■□□□□ 0.25
GNE-204ENST00000539208 C22orf42Q6IC83 251 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 DGAT2L6Q6ZPD8 337 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 Q6ZS52 159 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 CDK20Q8IZL9 346 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 OR4F15Q8NGB8 312 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 OR52L1Q8NGH7 329 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 COQ7Q99807 217 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 ZNF576Q9H609 170 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 HINT3Q9NQE9 182 aaKnown RBP16.61■□□□□ 0.25
GNE-204ENST00000539208 MTCH2Q9Y6C9 303 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 CSNK1G3Q9Y6M4 447 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 CEP290O15078 2479 aa16.61■□□□□ 0.25
GNE-204ENST00000539208 NPIPA5A0A0B4J1W7 369 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 NPIPA7E9PJI5 369 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 BHLHE40O14503 412 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 RCBTB2O95199 551 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 SLC2A10O95528 541 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 NPIPA8P0DM63 369 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 IFI30P13284 250 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 SLC9A3P48764 834 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 SKP1P63208 163 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 PLAURQ03405 335 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 AMZ1Q400G9 498 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 GARNL3Q5VVW2 1013 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 HSDL2Q6YN16 418 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 SYT13Q7L8C5 426 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 CXXC5Q7LFL8 322 aaKnown RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 SHFQ7M4L6 423 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 LHFPL3Q86UP9 236 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 CPOQ8IVL8 374 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 LNX2Q8N448 690 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 KLHL36Q8N4N3 616 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 AVL9Q8NBF6 648 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 BBS1Q8NFJ9 593 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 FANK1Q8TC84 345 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 ASB15Q8WXK1 588 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 TMEM203Q969S6 136 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 C1GALT1C1Q96EU7 318 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 LRRC61Q9BV99 259 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 TMEM27Q9HBJ8 222 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 ERVK13-1Q9NX77 482 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 NDRG2Q9UN36 371 aaKnown RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 GSTK1Q9Y2Q3 226 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 TRDV1A0A1B0GX56 115 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 RNH1P13489 461 aaKnown RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 BMP7P18075 431 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 PSG6Q00889 435 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 ZNHIT3Q15649 155 aaPredicted RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 ARMC4Q5T2S8 1044 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 TMPRSS11AQ6ZMR5 421 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 PFN4Q8NHR9 129 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 SLC35B4Q969S0 331 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 C20orf141Q9NUB4 165 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 IL20RAQ9UHF4 553 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 CAB39Q9Y376 341 aaPredicted RBP16.6■□□□□ 0.25
GNE-204ENST00000539208 MED31Q9Y3C7 131 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 CMAHPQ9Y471 501 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 V9GYH0 126 aa16.6■□□□□ 0.25
GNE-204ENST00000539208 RGS5O15539 181 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 AKAP8O43823 692 aaKnown RBP16.59■□□□□ 0.25
GNE-204ENST00000539208 CTSBP07858 339 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 IGLV3-21P80748 117 aaPredicted RBP16.59■□□□□ 0.25
GNE-204ENST00000539208 ZSWIM7Q19AV6 140 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 CRTC2Q53ET0 693 aaPredicted RBP16.59■□□□□ 0.25
GNE-204ENST00000539208 ZAR1Q86SH2 424 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 BPIFA2Q96DR5 249 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 ABHD8Q96I13 439 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms