RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ZAR1Q86SH2 424 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 VRK2Q86Y07 508 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 TMEM156Q8N614 296 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 OR4D11Q8NGI4 311 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 OR2T29Q8NH02 315 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 PROX1Q92786 737 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 HGDQ93099 445 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 ZG16BQ96DA0 208 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 SPATA5L1Q9BVQ7 753 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 AMBRA1Q9C0C7 1298 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 RNF32Q9H0A6 362 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 RYDENQ9NUL5 291 aaKnown RBP15.81■□□□□ 0.12
CLN6-202ENST00000538696 ANKRD10Q9NXR5 420 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 NDUFAF4Q9P032 175 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 MKLN1Q9UL63 735 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 SH3GLB1Q9Y371 365 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 WDR45Q9Y484 360 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 PCDHGB3Q9Y5G1 929 aa15.81■□□□□ 0.12
CLN6-202ENST00000538696 CNTRLQ7Z7A1 2325 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 NPIPA5A0A0B4J1W7 369 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 NPIPA7E9PJI5 369 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 K7EM74 188 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 UGT2B11O75310 529 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 REM1O75628 298 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 AK1P00568 194 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 FAM87AP0C7U9 286 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 NPIPA8P0DM63 369 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 NAGAP17050 411 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 YAP1P46937 504 aaKnown RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 NTRK2Q16620 822 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 NRF1Q16656 503 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLN6-202ENST00000538696 PPP4R4Q6NUP7 873 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 IL20RBQ6UXL0 311 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 ZNF227Q86WZ6 799 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 CARM1Q86X55 608 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 LACC1Q8IV20 430 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 GPALPP1Q8IXQ4 340 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 ZNF619Q8N2I2 560 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 VANGL1Q8TAA9 524 aaPredicted RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 DIO2Q92813 273 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 ABHD17AQ96GS6 310 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 ZNF300Q96RE9 604 aaPredicted RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 WFDC6Q9BQY6 131 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 UTP23Q9BRU9 249 aaKnown RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 PINK1Q9BXM7 581 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 TRIM45Q9H8W5 580 aaPredicted RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 HPF1Q9NWY4 346 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 CNOT11Q9UKZ1 510 aaKnown RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 MAGED1Q9Y5V3 778 aaPredicted RBP15.8■□□□□ 0.12
CLN6-202ENST00000538696 MGAQ8IWI9 3026 aa15.8■□□□□ 0.12
CLN6-202ENST00000538696 CENPVL1A0A0U1RR11 272 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR5H15A6NDH6 313 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR6C70A6NIJ9 312 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 J3KTA2 159 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 M0R3H8 397 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 EI24O14681 340 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 KIAA0513O60268 411 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 RASAL1O95294 804 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 PABPC4LP0CB38 370 aaKnown RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 CYP4B1P13584 511 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 IL12BP29460 328 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 KRT20P35900 424 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 DCTP40126 519 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CD96P40200 585 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CASRP41180 1078 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CYB561P49447 251 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 TMED10P49755 219 aaKnown RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 OC90Q02509 493 aaPredicted RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 KCNC4Q03721 635 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 KCNAB2Q13303 367 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 ZNF311Q5JNZ3 666 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 DND1Q8IYX4 353 aaKnown RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 HS3ST5Q8IZT8 346 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CYP4Z2PQ8N1L4 340 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 PACRGLQ8N7B6 248 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR10G3Q8NGC4 313 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR5M3Q8NGP4 307 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR52P1PQ8NH57 321 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 OR5K1Q8NHB7 308 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 RASSF5Q8WWW0 418 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 ADOQ96SZ5 270 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 BARD1Q99728 777 aaKnown RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 ARHGAP9Q9BRR9 750 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 SAP130Q9H0E3 1048 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 VCXQ9H320 206 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 FLRT3Q9NZU0 649 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 MRTO4Q9UKD2 239 aaKnown RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 ZNF443Q9Y2A4 671 aaPredicted RBP15.79■□□□□ 0.12
CLN6-202ENST00000538696 TP53TG5Q9Y2B4 290 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CHST2Q9Y4C5 530 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 CSAG2Q9Y5P2 127 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 ENPP4Q9Y6X5 453 aa15.79■□□□□ 0.12
CLN6-202ENST00000538696 C7orf72A4D263 438 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 CDK2AP1O14519 115 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 E2F6O75461 281 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 STX11O75558 287 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 NEURL1O76050 574 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 IFNW1P05000 195 aa15.78■□□□□ 0.12
CLN6-202ENST00000538696 RPS4Y1P22090 263 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms