RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SFRP5Q5T4F7 317 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 GTF2IRD2BQ6EKJ0 949 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 GALNT18Q6P9A2 607 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 GTF2IRD2Q86UP8 949 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 TUSC5Q8IXB3 177 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 LILRA2Q8N149 483 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 OR4C3Q8NH37 302 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 FBXO30Q8TB52 745 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 GPR151Q8TDV0 419 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 HSD17B8Q92506 261 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 ZBTB8AQ96BR9 441 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 ELP4Q96EB1 424 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 C11orf24Q96F05 449 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 REXO5Q96IC2 774 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 C16orf45Q96MC5 204 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 AMDHD1Q96NU7 426 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 TMEM237Q96Q45 408 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 KCNA7Q96RP8 456 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF382Q96SR6 550 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 RHNO1Q9BSD3 238 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 SHCBP1LQ9BZQ2 653 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 C3orf14Q9HBI5 128 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 LRTM1Q9HBL6 345 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 CDC42EP3Q9UKI2 254 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 TIMM22Q9Y584 194 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 FAM234BA2RU67 622 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 ALG1L2C9J202 215 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 HAX1O00165 279 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 OXSR1O95747 527 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 FESP07332 822 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 COL6A2P12110 1019 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 NUDT6P53370 316 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 C21orf58P58505 322 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 SLC7A5Q01650 507 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 HSPB3Q12988 150 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 STK11Q15831 433 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 TMEM249Q2WGJ8 235 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 CPTPQ5TA50 214 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 SEZ6L2Q6UXD5 910 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 TMEM151AQ8N4L1 468 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 POC1BQ8TC44 478 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 PIWIL2Q8TC59 973 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 HTRA1Q92743 480 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 KLHL15Q96M94 604 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 PAFAH2Q99487 392 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 BEX2Q9BXY8 128 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 SRXN1Q9BYN0 137 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 FAIMQ9NVQ4 179 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 CISD1Q9NZ45 108 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 KLHL13Q9P2N7 655 aa12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 POLR3HQ9Y535 204 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-206ENST00000538456 C7orf72A4D263 438 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 TRIM49D1C9J1S8 452 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 PABPC4LP0CB38 370 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 GSTM5P46439 218 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 CDH11P55287 796 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 ETF1P62495 437 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 SRSF2Q01130 221 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 RNPS1Q15287 305 aaKnown RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 NRF1Q16656 503 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 FAM71E1Q6IPT2 247 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 BHLHA15Q7RTS1 189 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF551Q7Z340 670 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 SZRD1Q7Z422 152 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 ZAR1Q86SH2 424 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 MMGT1Q8N4V1 131 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 ZDHHC18Q9NUE0 388 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 GRID1Q9ULK0 1009 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 B3GALT5Q9Y2C3 310 aa12.43□□□□□ -0.42
SMARCA4-206ENST00000538456 A0A096LNT2 108 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 SHISA9B4DS77 424 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 POC1B-GALNT4F8VUJ3 575 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 LYZL6O75951 148 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 HPGDP15428 266 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 TAC1P20366 129 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 SERPINB9P50453 376 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 PRKAG1P54619 331 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 CASP9P55211 416 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 FOXF1Q12946 379 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 ITGADQ13349 1161 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 P2RY6Q15077 328 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 CLEC2AQ6UVW9 174 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 DTX2Q86UW9 622 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 TRABD2AQ86V40 505 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 ATP6V1C2Q8NEY4 427 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 ACTRT2Q8TDY3 377 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 CPNE4Q96A23 557 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 TNFRSF13CQ96RJ3 184 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
SMARCA4-206ENST00000538456 AMBRA1Q9C0C7 1298 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms