RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 HHLA1C9JL84 531 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 NPIPA7E9PJI5 369 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 NPIPA8P0DM63 369 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 GJA5P36382 358 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 YPEL5P62699 121 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF616Q08AN1 781 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 CNN3Q15417 329 aaKnown RBP15.82■□□□□ 0.12
SCARB1-205ENST00000538291 TP53I3Q53FA7 332 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 C3orf58Q8NDZ4 430 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SPIN2AQ99865 258 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SPIN2BQ9BPZ2 258 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 CUTCQ9NTM9 273 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SMOXQ9NWM0 555 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 USP36Q9P275 1121 aaKnown RBP15.82■□□□□ 0.12
SCARB1-205ENST00000538291 CAMK2AQ9UQM7 478 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SLC6A5Q9Y345 797 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 MITFO75030 526 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-205ENST00000538291 GABBR2O75899 941 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SLC22A10Q63ZE4 541 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 SFRP4Q6FHJ7 346 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-205ENST00000538291 OR9Q2Q8NGE9 314 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 TOMM40LQ969M1 308 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 INTS14Q96SY0 518 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 MACROD1Q9BQ69 325 aa15.82■□□□□ 0.12
SCARB1-205ENST00000538291 DCDC2BA2VCK2 349 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 RPS17P08708 135 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 OR8U9P0C7N5 309 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 PRLHRP49683 370 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 FXYD4P59646 89 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 PKDCCQ504Y2 493 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 FAM78AQ5JUQ0 283 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 DCAF12Q5T6F0 453 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 OR5D16Q8NGK9 328 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 NGBQ9NPG2 151 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 PLEKHJ1Q9NW61 149 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 POLHQ9Y253 713 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 SRPX2O60687 465 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 GALR3O60755 368 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 GLSO94925 669 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 HIST1H1TP22492 207 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 IL32P24001 234 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF300Q96RE9 604 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 MYADMQ96S97 322 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 NTMT1Q9BV86 223 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 APMAPQ9HDC9 416 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 CNOT11Q9UKZ1 510 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 NUDT21O43809 227 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 TOXO94900 526 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 PCBD1P61457 104 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF695Q8IW36 515 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 OR56B2PQ8NGI1 322 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF587Q96SQ5 575 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ULBP3Q9BZM4 244 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 AQP9O43315 295 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 FRS3O43559 492 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 LCKP06239 509 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 SERPINE2P07093 398 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ADARB1P78563 741 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 SIX1Q15475 284 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 BCL2A1Q16548 175 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 TMEM150AQ86TG1 271 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 MUCL1Q96DR8 90 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 TCTN2Q96GX1 697 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 VRK1Q99986 396 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 SIT1Q9Y3P8 196 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ACPPP15309 386 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 CPOXP36551 454 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 WNT4P56705 351 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 EXOSC7Q15024 291 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 SDR9C7Q8NEX9 313 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 POC1BQ8TC44 478 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 AP1S3Q96PC3 154 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF649Q9BS31 505 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 PBDC1Q9BVG4 233 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 BTBD2Q9BX70 525 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 RNF38Q9H0F5 515 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 FOLH1BQ9HBA9 442 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 UBQLN4Q9NRR5 601 aa15.81■□□□□ 0.12
SCARB1-205ENST00000538291 DNMT3BQ9UBC3 853 aaKnown RBP15.81■□□□□ 0.12
SCARB1-205ENST00000538291 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 C2orf72A6NCS6 295 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 GPR75O95800 540 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 CCR7P32248 378 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 TMEM244Q5VVB8 128 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 ASRGL1Q7L266 308 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 PRRC1Q96M27 445 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 OR51B6Q9H340 312 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 HMX3A6NHT5 357 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 H7C2Y5 167 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 C1orf105O95561 183 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 SGSHP51688 502 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 S100A12P80511 92 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 DPY19L4Q7Z388 723 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 PAPD5Q8NDF8 572 aaKnown RBP15.8■□□□□ 0.12
SCARB1-205ENST00000538291 EDAQ92838 391 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 SLC6A16Q9GZN6 736 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 NXF5Q9H1B4 397 aaKnown RBP15.8■□□□□ 0.12
SCARB1-205ENST00000538291 CSNK1G1Q9HCP0 422 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 FAM230AA0A1W2PPH8 454 aa15.8■□□□□ 0.12
SCARB1-205ENST00000538291 SCRG1O75711 98 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms