RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SLC25A25Q6KCM7 469 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 SYNPOQ8N3V7 929 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 SPEM1Q8N4L4 309 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 CCL4L1Q8NHW4 92 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 ZMYND19Q96E35 227 aaPredicted RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 SLC6A7Q99884 636 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 WDR83Q9BRX9 315 aaKnown RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 WACQ9BTA9 647 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 KIR3DX1Q9H7L2 352 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 TAS2R10Q9NYW0 307 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 VSX1Q9NZR4 365 aaPredicted RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 ZNF221Q9UK13 617 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 NUP50Q9UKX7 468 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 NOP16Q9Y3C1 178 aaKnown RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 ARAP2Q8WZ64 1704 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ZSCAN5BA6NJL1 495 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 NDUFB2O95178 105 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 VNN2O95498 520 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CAPN3P20807 821 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CRABP1P29762 137 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 FRKP42685 505 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 REEP5Q00765 189 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PYCR3Q53H96 274 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ENTPD8Q5MY95 495 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 HENMT1Q5T8I9 393 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 MMP21Q8N119 569 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ACOT12Q8WYK0 555 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 RSC1A1Q92681 617 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CCDC74BQ96LY2 380 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 DMRTB1Q96MA1 342 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MUS81Q96NY9 551 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 TEX10Q9NXF1 929 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 KCNIP1Q9NZI2 227 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SH2B3Q9UQQ2 575 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 NOSIPQ9Y314 301 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 SNX11Q9Y5W9 270 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MBTPS2O43462 519 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PLRG1O43660 514 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 RASAL1O95294 804 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 HOXB9P17482 250 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 AMY2BP19961 511 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PCGF2P35227 344 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MAN2A2P49641 1150 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SLC26A5P58743 744 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 TGFBR3Q03167 851 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 NIPAL3Q6P499 406 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PDSS2Q86YH6 399 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SLC25A44Q96H78 314 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 ZNF597Q96LX8 424 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MKRN2Q9H000 416 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 ARNT2Q9HBZ2 717 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OBP2BQ9NPH6 170 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 INIPQ9NRY2 104 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ABCD2Q9UBJ2 740 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 FAM230AA0A1W2PPH8 454 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR5K3A6NET4 321 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 SEMA3DO95025 777 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PKLRP30613 574 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CLDN17P56750 224 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 DCAF7P61962 342 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 SELENOWP63302 87 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ROR2Q01974 943 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 CDK10Q15131 360 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR1Q1Q15612 314 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ZFP69Q49AA0 526 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 BCL7AQ4VC05 210 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 WBP2NLQ6ICG8 309 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR5AK2Q8NH90 309 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 FCAMRQ8WWV6 532 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PPP1R14BQ96C90 147 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 FEVQ99581 238 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MED11Q9P086 117 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PTBP2Q9UKA9 531 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 SMCO3A2RU48 225 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR7A17O14581 309 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MMP2P08253 660 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 GLULP15104 373 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 PVALBP20472 110 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 SYPL1Q16563 259 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 ZNF367Q7RTV3 350 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CNTN4Q8IWV2 1026 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 NEIL3Q8TAT5 605 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 THRSPQ92748 146 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 RPP25Q9BUL9 199 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 BEX2Q9BXY8 128 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 DEFB127Q9H1M4 99 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 BEX1Q9HBH7 125 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 KLHL42Q9P2K6 505 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 MBD2Q9UBB5 411 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 OR2AT4A6NND4 320 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 CLDN25C9JDP6 229 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 KLRC4-KLRK1H3BQV0 150 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 NUDT21O43809 227 aaKnown RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 MITFO75030 526 aaPredicted RBP5.02□□□□□ -1.61
LRP6-203ENST00000538239 UTS2O95399 124 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 STSP08842 583 aa5.02□□□□□ -1.61
LRP6-203ENST00000538239 GTF2F2P13984 249 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms