RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 APOA1P02647 267 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 ALPPP05187 535 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 RFX2P48378 723 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 SMIM11AP58511 58 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 DEFA1P59665 94 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 DEFA3P59666 94 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 TEKQ02763 1124 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 BAK1Q16611 211 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 DGAT2L6Q6ZPD8 337 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 C16orf62Q7Z3J2 963 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 GKN2Q86XP6 184 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 SIX5Q8N196 739 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 MORN4Q8NDC4 146 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 GPR151Q8TDV0 419 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 CHAC2Q8WUX2 184 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 TRMT61AQ96FX7 289 aaKnown RBP9.99□□□□□ -0.81
CLIP1-210ENST00000538120 SMAD5Q99717 465 aaKnown RBP9.99□□□□□ -0.81
CLIP1-210ENST00000538120 MAP3K3Q99759 626 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 CCDC3Q9BQI4 270 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 CNPPD1Q9BV87 410 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 PCED1AQ9H1Q7 454 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 IMPAD1Q9NX62 359 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 TOR4AQ9NXH8 423 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 CARD8Q9Y2G2 431 aa9.99□□□□□ -0.81
CLIP1-210ENST00000538120 DUXAA6NLW8 204 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 TFECO14948 347 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 FRS3O43559 492 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 OR10H3O60404 316 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 UGT2B17O75795 530 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SLITRK5O94991 958 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CT62P0C5K7 136 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CKMT1AP12532 417 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 OSMP13725 252 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ENDOUP21128 410 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CNR2P34972 360 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 RPS19P39019 145 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ETV6P41212 452 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SOX3P41225 446 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 GABRA4P48169 554 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 RAB38P57729 211 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 NXPH1P58417 271 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 RPL6Q02878 288 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ILKQ13418 452 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PRICKLE4Q2TBC4 344 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ARHGAP11BQ3KRB8 267 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 TYW3Q6IPR3 259 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ZER1Q7Z7L7 766 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 GJD3Q8N144 294 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SLC9A6Q92581 669 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 ST6GAL2Q96JF0 529 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CEP19Q96LK0 163 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PRRC1Q96M27 445 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CDX2Q99626 313 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 GPA33Q99795 319 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SLC30A2Q9BRI3 323 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 TTYH2Q9BSA4 534 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 FNDC11Q9BVV2 318 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CTPS2Q9NRF8 586 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 MAT2BQ9NZL9 334 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CALML5Q9NZT1 146 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 FBXL21Q9UKT6 434 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 A0A087WV62 115 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CENPVL1A0A0U1RR11 272 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 LILRA5A6NI73 299 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 WWP2O00308 870 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CHST10O43529 356 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 FOXS1O43638 330 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PLOD3O60568 738 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PROS1P07225 676 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 BCKDHBP21953 392 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PRKAR1BP31321 381 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SOX6P35712 828 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 MAP3K8P41279 467 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CAPZBP47756 277 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 DAB2P98082 770 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SRSF5Q13243 272 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 MADCAM1Q13477 382 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 GPR50Q13585 617 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 TAB1Q15750 504 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 OGFOD3Q6PK18 319 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 FAM92BQ6ZTR7 304 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SPEM1Q8N4L4 309 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 OR52P1PQ8NH57 321 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 WDR36Q8NI36 951 aaKnown RBP9.98□□□□□ -0.81
CLIP1-210ENST00000538120 HSPA12BQ96MM6 686 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 IL4I1Q96RQ9 567 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 PIGUQ9H490 435 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 SPACA6W5XKT8 324 aa9.98□□□□□ -0.81
CLIP1-210ENST00000538120 TDRD6O60522 2096 aaKnown RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SNX4O95219 450 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SOX14O95416 240 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 NTN1O95631 604 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 NT5EP21589 574 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 MMP11P24347 488 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 POU1F1P28069 291 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TRHRP34981 398 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms