RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 UHMK1Q8TAS1 419 aaKnown RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 RNF128Q8TEB7 428 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 UBASH3BQ8TF42 649 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 SLC25A28Q96A46 364 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 TLCD1Q96CP7 247 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 MCM8Q9UJA3 840 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 A0A087WZY1 265 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 J3QLI3 93 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 FOXE1O00358 373 aaPredicted RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 ADAMDEC1O15204 470 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 NTN1O95631 604 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 FAM58BPP0C7Q3 252 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 MTHFD2P13995 350 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 CPMP14384 443 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 ETS1P14921 441 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 SERPINF1P36955 418 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 GDF5P43026 501 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 OR3A2P47893 321 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 RAC1P63000 192 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 GNGT1P63211 74 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 TRIP13Q15645 432 aaPredicted RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 GSTA5Q7RTV2 222 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 ZNF100Q8IYN0 542 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 SLC43A2Q8N370 569 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 ADGRG7Q96K78 797 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 SORBS1Q9BX66 1292 aaKnown RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 CENPHQ9H3R5 247 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 FN3KRPQ9HA64 309 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 IARS2Q9NSE4 1012 aaKnown RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 NTMQ9P121 344 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 ABCG2Q9UNQ0 655 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 MOKQ9UQ07 419 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 OARD1Q9Y530 152 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 CORINQ9Y5Q5 1042 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 A0A0G2JMP0 313 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 A0A0X1KG70 313 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 ZNF814B7Z6K7 855 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 DNALI1O14645 258 aaPredicted RBP8.02□□□□□ -1.13
USP28-205ENST00000537706 TSPAN2O60636 221 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 SHBGP04278 402 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 CASP2P42575 452 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 CDKN2DP55273 166 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 RAB10P61026 200 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 SLC29A2Q14542 456 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
USP28-205ENST00000537706 ADNP2Q6IQ32 1131 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 SPATA19Q7Z5L4 167 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 ADAMTSL2Q86TH1 951 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 OR4M2Q8NGB6 313 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 WDR34Q96EX3 536 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 PDLIM5Q96HC4 596 aaKnown RBP8.02□□□□□ -1.13
USP28-205ENST00000537706 OR51B5Q9H339 312 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 KLHL9Q9P2J3 617 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 TESQ9UGI8 421 aaKnown RBP8.02□□□□□ -1.13
USP28-205ENST00000537706 PLLPQ9Y342 182 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 OR10H1Q9Y4A9 318 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 MMP24Q9Y5R2 645 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
USP28-205ENST00000537706 A0A1W2PR48 441 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 RAD51DO75771 328 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 PRSS23O95084 383 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 SAGP10523 405 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 COX5AP20674 150 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 S1PR1P21453 382 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 VPS41P49754 854 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 LOXL3P58215 753 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 BAMBIQ13145 260 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 CHIT1Q13231 466 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 TRIP10Q15642 601 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 TBCCQ15814 346 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 ZNF239Q16600 458 aaKnown RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 PDK4Q16654 411 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 MST1LQ2TV78 715 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 C1QTNF12Q5T7M4 302 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 SAXO2Q658L1 398 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 OR7E24Q6IFN5 339 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 Q6ZPA2 131 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 FCRLAQ7L513 359 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 NKAPQ8N5F7 415 aaKnown RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 ABHD3Q8WU67 409 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 RNF138Q8WVD3 245 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 RSPO3Q9BXY4 272 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 ROPN1BQ9BZX4 212 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 ROPN1Q9HAT0 212 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 BEX1Q9HBH7 125 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 ACSS1Q9NUB1 689 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 PDP1Q9P0J1 537 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 GPR55Q9Y2T6 319 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 ASB4Q9Y574 426 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 NPEPPSL1A6NEC2 478 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 SDR42E2A6NKP2 422 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 GJE1A6NN92 205 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 RGS16O15492 202 aaPredicted RBP8.01□□□□□ -1.13
USP28-205ENST00000537706 TTC4O95801 387 aa8.01□□□□□ -1.13
USP28-205ENST00000537706 ABHD2P08910 425 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms