RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LUMP51884 338 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TNFRSF9Q07011 255 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ACSM1Q08AH1 577 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HNF4GQ14541 408 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SYT14P1Q58G82 188 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 RNASE10Q5GAN6 216 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 NCMAPQ5T1S8 102 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SFXN4Q6P4A7 337 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 WDR53Q7Z5U6 358 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 BCDIN3DQ7Z5W3 292 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 RNF149Q8NC42 400 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2G2Q8NGZ5 317 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HUS1BQ8NHY5 278 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 SORCS1Q8WY21 1168 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 EDEM1Q92611 657 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TSSK3Q96PN8 268 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TAAR9Q96RI9 348 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 MESP1Q9BRJ9 268 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ZPBPQ9BS86 351 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 NAA11Q9BSU3 229 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TEX101Q9BY14 249 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 CHST5Q9GZS9 411 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 TUBA4BQ9H853 241 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 HRASLSQ9HDD0 168 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF302Q9NR11 478 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 WWOXQ9NZC7 414 aa7.99□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF705EA8MWA4 302 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 M0QZ92 97 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ADAM10O14672 748 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TOX3O15405 576 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 PCDH7O60245 1069 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 UGDHO60701 494 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2F2O95006 317 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 HLA-DQB2P05538 268 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 NME1P15531 152 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TNFRSF1BP20333 461 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CAP2P40123 477 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF140P52738 457 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 PNLIPRP2P54317 469 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2F1Q13607 317 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 INPP5JQ15735 1006 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ALG11Q2TAA5 492 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TIGD5Q53EQ6 642 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 COL13A1Q5TAT6 717 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CLEC9AQ6UXN8 241 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF783Q6ZMS7 281 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF813Q6ZN06 617 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 PARGQ86W56 976 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 FBXO15Q8NCQ5 510 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR4L1Q8NH43 312 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF461Q8TAF7 563 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ST7LQ8TDW4 575 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 XAGE5Q8WWM1 108 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 COPS8Q99627 209 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GPR21Q99679 349 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 UTP23Q9BRU9 249 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RSRP1Q9BUV0 290 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF471Q9BX82 626 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC25A51Q9H1U9 297 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM185BQ9H7F4 350 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF408Q9H9D4 720 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 NLE1Q9NVX2 485 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RCE1Q9Y256 329 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 NUP205Q92621 2012 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 FARS2O95363 451 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 FGF19O95750 216 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CPT2P23786 658 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CCR1P32246 355 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 THBS2P35442 1172 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ANXA11P50995 505 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 DGKEP52429 567 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 H2BFSP57053 126 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ADIGQ0VDE8 80 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RBM39Q14498 530 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RSU1Q15404 277 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TRAM1Q15629 374 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC10A6Q3KNW5 377 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM244Q5VVB8 128 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 C18orf63Q68DL7 685 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 C11orf88Q6PI97 169 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 LINGO4Q6UY18 593 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SPNS3Q6ZMD2 512 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 IL34Q6ZMJ4 242 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC30A8Q8IWU4 369 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GTPBP8Q8N3Z3 284 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 KCNRGQ8N5I3 272 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 EID2Q8N6I1 236 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC25A36Q96CQ1 311 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 R3HDM4Q96D70 268 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MALSU1Q96EH3 234 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 WDR89Q96FK6 387 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CLCC1Q96S66 551 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TEAD3Q99594 435 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 POLR2J3Q9H1A7 115 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RIMS4Q9H426 269 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms