RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 LAMP1P11279 417 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 CCL5P13501 91 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 RAB3AP20336 220 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DAP3P51398 398 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ADARB1P78563 741 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 GLO1Q04760 184 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF648Q5T619 568 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 NDUFAF5Q5TEU4 345 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 KDELC1Q6UW63 502 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 PAPD5Q8NDF8 572 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 OR51Q1Q8NH59 317 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DDX1Q92499 740 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MS4A4EQ96PG1 132 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 CUTCQ9NTM9 273 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MARCH4Q9P2E8 410 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 TPPPO94811 219 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ETV5P41161 510 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 TMEM244Q5VVB8 128 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SYT17Q9BSW7 474 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SFXN1Q9H9B4 322 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 PLCXD1Q9NUJ7 323 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ARMC1Q9NVT9 282 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 GLTPQ9NZD2 209 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 A0A1W2PPV4 95 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TGM5O43548 720 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 EGFP01133 1207 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 DDCP20711 480 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 C5AR1P21730 350 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SPINT3P49223 89 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 MGAT3Q09327 533 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 GPR50Q13585 617 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 PEA15Q15121 130 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 DUSP7Q16829 419 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TSSK4Q6SA08 328 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 NLGN4XQ8N0W4 816 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TMEM185AQ8NFB2 350 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 PTERQ96BW5 349 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SFXN2Q96NB2 322 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ZFYVE21Q9BQ24 234 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 NMNAT1Q9HAN9 279 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CD300AQ9UGN4 299 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SLC6A14Q9UN76 642 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FAM72CH0Y354 149 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ADAMTS4O75173 837 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FBXO45P0C2W1 286 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 S100A7P31151 101 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CA5AP35218 305 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 APLNRP35414 380 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 HHEXQ03014 270 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ACY1Q03154 408 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CAMK2DQ13557 499 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 EIF2B1Q14232 305 aaKnown RBP10.04□□□□□ -0.8
CLIP1-209ENST00000537178 MICAQ29983 383 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FAM72AQ5TYM5 149 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 RTL6Q6ICC9 239 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FAM72DQ6L9T8 149 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF585AQ6P3V2 769 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CDHR3Q6ZTQ4 885 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FAM72BQ86X60 149 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 HCAR1Q9BXC0 346 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 RHBDD3Q9Y3P4 386 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 PTGDR2Q9Y5Y4 395 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CACNG2Q9Y698 323 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 PCNTO95613 3336 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 LOC285095A0A1B0GVY8 99 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 LAMTOR5O43504 91 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 RFPL3O75679 317 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TGM6O95932 706 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ETV6P41212 452 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CDKN2DP55273 166 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 DLX5P56178 289 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 HSD17B7P56937 341 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TGFBR3Q03167 851 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ARHGAP19Q14CB8 494 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CMPK2Q5EBM0 449 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 STEAP4Q687X5 459 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 RDH10Q8IZV5 341 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SLC15A4Q8N697 577 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 OR1J4Q8NGS1 313 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 L3HYPDHQ96EM0 354 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 COG8Q96MW5 612 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF334Q9HCZ1 680 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-209ENST00000537178 WDR6Q9NNW5 1121 aaKnown RBP10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SLCO3A1Q9UIG8 710 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ANKRD30BLA7E2S9 258 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 FOXD2O60548 495 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-209ENST00000537178 BMP4P12644 408 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 CHATP28329 748 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms