RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GLRX2Q9NS18 164 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MID2Q9UJV3 735 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CLEC4AQ9UMR7 237 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TMED5Q9Y3A6 229 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 A0A1W2PRB8 838 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 C7orf72A4D263 438 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SMIM23A6NLE4 172 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ADAMDEC1O15204 470 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CXCL13O43927 109 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZNF500O60304 480 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 OPN1LWP04000 364 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ALOX5P09917 674 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LINC00032P0C843 101 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 KRT4P19013 534 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SERPINB4P48594 390 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DUSP5Q16690 384 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PLPPR5Q32ZL2 321 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 BEX5Q5H9J7 111 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ESPNLQ6ZVH7 1005 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 YTHDF3Q7Z739 585 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZAR1Q86SH2 424 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MISPQ8IVT2 679 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 C10orf107Q8IVU9 208 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 HOMEZQ8IX15 550 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 COX18Q8N8Q8 333 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 OR2V1Q8NHB1 315 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MTERF3Q96E29 417 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PERPQ96FX8 193 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SH3YL1Q96HL8 342 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RNF145Q96MT1 663 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 NPAS1Q99742 590 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TRMOQ9BU70 441 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 BDH2Q9BUT1 245 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TUBB1Q9H4B7 451 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MED17Q9NVC6 651 aa17.62■□□□□ 0.41
TNFRSF1B-204ENST00000536782 H7C1Q1 480 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SCDO00767 359 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TRIM13O60858 407 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 HSPA4LO95757 839 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LY6G6DO95868 133 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 THBDP07204 575 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ME2P23368 584 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PSMA4P25789 261 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ASMTP46597 345 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GALNTL6Q49A17 601 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PDSS1Q5T2R2 415 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 KANK2Q63ZY3 851 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 STAC2Q6ZMT1 411 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 BEND4Q6ZU67 534 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 R3HCC1LQ7Z5L2 792 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 C4orf33Q8N1A6 199 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CIARTQ8N365 385 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 JADE3Q92613 823 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ARSGQ96EG1 525 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 C16orf58Q96GQ5 468 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GATA5Q9BWX5 397 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TMEM185BQ9H7F4 350 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FBXO34Q9NWN3 711 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DNAJC15Q9Y5T4 150 aa17.61■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 A0A1W2PQD3 144 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TNFSF11O14788 317 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LSM1O15116 133 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 KLF4O43474 513 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DDX5P17844 614 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PRIM2P49643 509 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 POU6F2P78424 691 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PCLAFQ15004 111 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 HBMQ6B0K9 141 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GTF2IRD2BQ6EKJ0 949 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PLEKHM3Q6ZWE6 761 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GTF2IRD2Q86UP8 949 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 STK32CQ86UX6 486 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DDIASQ8IXT1 998 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 B4GALNT2Q8NHY0 566 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PPP1R14CQ8TAE6 165 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 EPS8L3Q8TE67 593 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 USF3Q68DE3 2245 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RTTNQ86VV8 2226 aa17.6■□□□□ 0.41
TNFRSF1B-204ENST00000536782 A0A0J9YW62 118 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 EFNA1P20827 205 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 NR1H2P55055 460 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MLC1Q15049 377 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 EXOSC6Q5RKV6 272 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CCNJQ5T5M9 372 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LRIG3Q6UXM1 1119 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TRABD2AQ86V40 505 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LILRA2Q8N149 483 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 POC1BQ8TC44 478 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 OSTF1Q92882 214 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FAM120BQ96EK7 910 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CHMP6Q96FZ7 201 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 KLHL15Q96M94 604 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 BTBD2Q9BX70 525 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GSX2Q9BZM3 304 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DUSP22Q9NRW4 184 aa17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZCCHC3Q9NUD5 404 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TMEM114B3SHH9 223 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms