RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KCNE5Q9UJ90 142 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 VDAC3Q9Y277 283 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ZNF337Q9Y3M9 751 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 PHF3Q92576 2039 aaKnown RBP11.89□□□□□ -0.51
PRKDC-206ENST00000536429 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CCDC154A6NI56 674 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CD8B2A6NJW9 211 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CLCA1A8K7I4 914 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 SLC22A3O75751 556 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CD1EP15812 388 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 POU3F2P20265 443 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CHMP24386 653 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 GCKP35557 465 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF136P52737 540 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 AQP5P55064 265 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CLDN20P56880 219 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF117Q03924 483 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 GANABQ14697 944 aaKnown RBP11.89□□□□□ -0.51
PRKDC-206ENST00000536429 GSTA3Q16772 222 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 TMEM44Q2T9K0 475 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 GTDC1Q4AE62 458 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 HEPHL1Q6MZM0 1159 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 CBLN3Q6UW01 205 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ENPP6Q6UWR7 440 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 HMGN2P46Q86SG4 172 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 RNF130Q86XS8 419 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 LACC1Q8IV20 430 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 UBQLNLQ8IYU4 475 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ZPLD1Q8TCW7 415 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 MIPOL1Q8TD10 442 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 VPS33AQ96AX1 596 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ARSGQ96EG1 525 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 THOC1Q96FV9 657 aaKnown RBP11.89□□□□□ -0.51
PRKDC-206ENST00000536429 PANX1Q96RD7 426 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ZBTB18Q99592 522 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 PTGES2Q9H7Z7 377 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 KCNJ16Q9NPI9 418 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 MED17Q9NVC6 651 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 LRBAP50851 2863 aa11.89□□□□□ -0.51
PRKDC-206ENST00000536429 APCP25054 2843 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 PCNX3Q9H6A9 2034 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MBD3L4A6NDZ8 208 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MBD3L3A6NE82 208 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MBD3L5A6NJ08 208 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 H3BML4 177 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 SEC14L5O43304 696 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 HCRTR2O43614 444 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 BCAS1O75363 584 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 TGM6O95932 706 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 COX6B1P14854 86 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 HPGDP15428 266 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 IGFBP2P18065 325 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 BMP5P22003 454 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MSX1P28360 303 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 TIMP3P35625 211 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 CHI3L1P36222 383 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ATP12AP54707 1039 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 FOXF2Q12947 444 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 GPR68Q15743 365 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MAPK14Q16539 360 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 PLPPR5Q32ZL2 321 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ARHGAP11BQ3KRB8 267 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 TIGD2Q4W5G0 525 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 COX20Q5RI15 118 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 PDZK1Q5T2W1 519 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF621Q6ZSS3 439 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 LSRQ86X29 649 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MIER2Q8N344 545 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF614Q8N883 585 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 GLB1L3Q8NCI6 653 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MBD3L2Q8NHZ7 208 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 POC1BQ8TC44 478 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 PNPT1Q8TCS8 783 aaKnown RBP11.88□□□□□ -0.51
PRKDC-206ENST00000536429 PHOSPHO1Q8TCT1 267 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 XAGE5Q8WWM1 108 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 SMPDL3BQ92485 455 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 TRIM8Q9BZR9 551 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF350Q9GZX5 532 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 ENKD1Q9H0I2 346 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 TCF7L2Q9NQB0 619 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 MKLN1Q9UL63 735 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 CARD8Q9Y2G2 431 aa11.88□□□□□ -0.51
PRKDC-206ENST00000536429 DUXAA6NLW8 204 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 HSPB2A8KAH6 182 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 HMGN4O00479 90 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 POLR3GO15318 223 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 UGT2B17O75795 530 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 OPN1LWP04000 364 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 IL6P05231 212 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 IL11P20809 199 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 POLR2JP52435 117 aaKnown RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 DLX5P56178 289 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms