RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SNRPD2P62316 118 aaKnown RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 PSG6Q00889 435 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 CSTF3Q12996 717 aaKnown RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF628Q5EBL2 1059 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SPANXN3Q5MJ09 141 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FAHD2BQ6P2I3 314 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FCRLAQ7L513 359 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 ZC3HC1Q86WB0 502 aaKnown RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 C1QL4Q86Z23 238 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 NAT8LQ8N9F0 302 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 PDPRQ8NCN5 879 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 POC1BQ8TC44 478 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SLC9A6Q92581 669 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 TAF15Q92804 592 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 EXT2Q93063 718 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 KLHL29Q96CT2 875 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FAHD2AQ96GK7 314 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 KLHL15Q96M94 604 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SUCNR1Q9BXA5 334 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 TSPY26PQ9H489 355 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 ANKZF1Q9H8Y5 726 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FKRPQ9H9S5 495 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 GP6Q9HCN6 339 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FAM120CQ9NX05 1096 aaKnown RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 ZKSCAN5Q9Y2L8 839 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 TRAF6Q9Y4K3 522 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 PPIAL4AQ9Y536 164 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 IGHV3-15A0A0B4J1V0 119 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 A0A1W2PRB8 838 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 C1orf226A1L170 272 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 H0YIV9 168 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 GOLGA6L22H0YM25 854 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 IPO7O95373 1038 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 ANGPTL1O95841 491 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 IGHV3-9P01782 118 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 FGGP02679 453 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CD1DP15813 335 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 ME2P23368 584 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 VAMP1P23763 118 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 SERPINF1P36955 418 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 PIK3CGP48736 1102 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 MANFP55145 182 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 POU4F1Q01851 419 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 C17orf67Q0P5P2 114 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 RIN1Q13671 783 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 ARL13AQ5H913 290 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 SH2D4BQ5SQS7 431 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CCNYL2Q5T2Q4 361 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 PDSS1Q5T2R2 415 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CPTPQ5TA50 214 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 TTC27Q6P3X3 843 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 UGT2A3Q6UWM9 527 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CCDC116Q8IYX3 515 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 LILRA2Q8N149 483 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 ZCCHC24Q8N2G6 241 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 TRIM58Q8NG06 486 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 OR9A2Q8NGT5 310 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF675Q8TD23 568 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 CPNE4Q96A23 557 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 LRRC37BQ96QE4 947 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 MRPL1Q9BYD6 325 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 BCO1Q9HAY6 547 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 DDX28Q9NUL7 540 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 MED17Q9NVC6 651 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 NTMQ9P121 344 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 GRIP1Q9Y3R0 1128 aa7.22□□□□□ -1.25
CLIP1-206ENST00000535290 HEATR1Q9H583 2144 aaKnown RBP7.22□□□□□ -1.25
CLIP1-206ENST00000535290 A0A087WZY1 265 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CIB4A0PJX0 185 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 C7orf72A4D263 438 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CCT8L1PA6NM43 557 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 LYNX1G3V0Z9 82 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 K7EPI3 171 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 FOXE1O00358 373 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 EFNA2O43921 213 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 BCAS2O75934 225 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 SEMA3DO95025 777 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 MSMBP08118 114 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 NUDT17P0C025 328 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 LYNX1P0DP58 116 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 IFNGR1P15260 489 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 RFX3P48380 749 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CLK3P49761 638 aaKnown RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 MAPK12P53778 367 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 FOXG1P55316 489 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PSPHP78330 225 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PHEXP78562 749 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PRR5P85299 388 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 SRSF4Q08170 494 aaKnown RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 PLPPR5Q32ZL2 321 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CYP27C1Q4G0S4 372 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 HP1BP3Q5SSJ5 553 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-206ENST00000535290 SPATA19Q7Z5L4 167 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 TRABD2AQ86V40 505 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF786Q8N393 782 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 TEX9Q8N6V9 391 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
CLIP1-206ENST00000535290 WDR31Q8NA23 367 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms