RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TLCD1Q96CP7 247 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ADGRG7Q96K78 797 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 RNF145Q96MT1 663 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 BTBD2Q9BX70 525 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TBL1XR1Q9BZK7 514 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 QRSL1Q9H0R6 528 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 MED17Q9NVC6 651 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TMED5Q9Y3A6 229 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 MRPS18CQ9Y3D5 142 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 RAP2CQ9Y3L5 183 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 DVL2O14641 736 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 TNFSF11O14788 317 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 BIRC5O15392 142 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CFLARO15519 480 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 SNNO75324 88 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 KCNH1O95259 989 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CGAP01215 116 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 GSNP06396 782 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 LINGO3P0C6S8 592 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 DDX5P17844 614 aaKnown RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CHMP24386 653 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 EPHA3P29320 983 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 SOAT1P35610 550 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 RPL14P50914 215 aaKnown RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 IST1P53990 364 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 POU6F2P78424 691 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 FOXF1Q12946 379 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 STX3Q13277 289 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 MLC1Q15049 377 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PON3Q15166 354 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 GUSBP1Q15486 140 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ZNHIT3Q15649 155 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 MAPK11Q15759 364 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PLPPR5Q32ZL2 321 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 KLHL26Q53HC5 615 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 COX20Q5RI15 118 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 DCST2Q5T1A1 773 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF550Q7Z398 422 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 C6orf120Q7Z4R8 191 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CDC20BQ86Y33 519 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 GRAMD2AQ8IUY3 354 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PM20D2Q8IYS1 436 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CNEP1R1Q8N9A8 125 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF610Q8N9Z0 462 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ATP6V1C2Q8NEY4 427 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CEP70Q8NHQ1 597 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 RFWD2Q8NHY2 731 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PPP1R14CQ8TAE6 165 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ROBO4Q8WZ75 1007 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 WNT2BQ93097 391 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 MTERF3Q96E29 417 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 OR52B2Q96RD2 323 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 UCN2Q96RP3 112 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 SDF2Q99470 211 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 RSPO3Q9BXY4 272 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ACTRT3Q9BYD9 372 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 SRXN1Q9BYN0 137 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PIGUQ9H490 435 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 TMBIM4Q9HC24 238 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 SSU72Q9NP77 194 aaKnown RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 CCM2LQ9NUG4 571 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF629Q9UEG4 869 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 KCNN3Q9UGI6 736 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 HAO1Q9UJM8 370 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 MKLN1Q9UL63 735 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ABCG2Q9UNQ0 655 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 PLEKHA6Q9Y2H5 1048 aa8.65□□□□□ -1.02
SSBP3-215ENST00000533946 ANK3Q12955 4377 aaKnown RBP8.65□□□□□ -1.02
SSBP3-215ENST00000533946 IGHV3-15A0A0B4J1V0 119 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 A6NNC1 897 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 A8MXE2 369 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 TMEM114B3SHH9 223 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 NDUFB5O43674 189 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 CXCL13O43927 109 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 SMNDC1O75940 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 SLITRK5O94991 958 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 OR12D1P0DN82 309 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 NID1P14543 1247 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PRPS1L1P21108 318 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 SFTPDP35247 375 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 C17orf67Q0P5P2 114 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 RCAN2Q14206 197 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 TSC22D1Q15714 1073 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 SPDYE7PQ495Y7 208 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 GTDC1Q4AE62 458 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PDZK1Q5T2W1 519 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PPP4R4Q6NUP7 873 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 TNFAIP8L2Q6P589 184 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ENPP6Q6UWR7 440 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ATG4DQ86TL0 474 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 OR4A15Q8NGL6 344 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 OR9I1Q8NGQ6 314 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 OR10D3Q8NH80 312 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms