RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DPY30Q9C005 99 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 BHLHE41Q9C0J9 482 aaPredicted RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 C20orf27Q9GZN8 174 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PIGMQ9H3S5 423 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PIGUQ9H490 435 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 TMEM185BQ9H7F4 350 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 AKTIPQ9H8T0 292 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 DUSP22Q9NRW4 184 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 RASSF1Q9NS23 344 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PRRC2AP48634 2157 aaKnown RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 A0A087WZY1 265 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 LINC01387J3KSC0 135 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 TNFSF13O75888 250 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CPSF4O95639 269 aaKnown RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 NGFRP08138 427 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 DHRS4L1P0CG22 281 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 EPXP11678 715 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 KCNJ5P48544 419 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CASP9P55211 416 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 NME5P56597 212 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CLDN8P56748 225 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 EEF1A1P68104 462 aaKnown RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 HBA1P69905 142 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 SORDQ00796 357 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 BST1Q10588 318 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CD226Q15762 336 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 DCST2Q5T1A1 773 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 EEF1A1P5Q5VTE0 462 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CROCCP2Q86T23 111 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 ANKRD46Q86W74 232 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 CDC20BQ86Y33 519 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 MISPQ8IVT2 679 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 RIMKLAQ8IXN7 391 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 NATD1Q8N6N6 113 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 TMCO5AQ8N6Q1 288 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF527Q8NB42 609 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 OR5D16Q8NGK9 328 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 OR4A15Q8NGL6 344 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 RFWD2Q8NHY2 731 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 SFXN5Q8TD22 340 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 MOAP1Q96BY2 351 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 PGM2Q96G03 612 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 SLC35G5Q96KT7 338 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 RNF145Q96MT1 663 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 OR7D2Q96RA2 312 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 SORT1Q99523 831 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 NPAS1Q99742 590 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 KLHDC3Q9BQ90 382 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 OPN3Q9H1Y3 402 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-225ENST00000533704 LIME1Q9H400 295 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 HHATLQ9HCP6 504 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 MED17Q9NVC6 651 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 PNPOQ9NVS9 261 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 GPATCH2Q9NW75 528 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 JKAMPQ9P055 326 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 STOML1Q9UBI4 398 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 PCDHGB4Q9UN71 923 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 KCNE3Q9Y6H6 103 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 HIVEP1P15822 2718 aa9.4□□□□□ -0.9
CAPN1-225ENST00000533704 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.91
CAPN1-225ENST00000533704 ITPR3Q14573 2671 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 SH3D21A4FU49 640 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 A8MXE2 369 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 H3BNH8 94 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 GTPBP1O00178 669 aaKnown RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 OIP5O43482 229 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 CXCL13O43927 109 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 TNFRSF21O75509 655 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 PLGP00747 810 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 CRHP06850 196 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 TUBBP07437 444 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF17P17021 662 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 LBPP18428 481 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 MATN1P21941 496 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ME2P23368 584 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 LCN1P31025 176 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 CCR4P51679 360 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 IST1P53990 364 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF117Q03924 483 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 PLPPR5Q32ZL2 321 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 NDUFAF6Q330K2 333 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 BHLHB9Q6PI77 547 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 OLIG3Q7RTU3 272 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 C6orf120Q7Z4R8 191 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 GGNQ86UU5 652 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 PSMA8Q8TAA3 256 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms