RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 LAIR1Q6GTX8 287 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 HEPHL1Q6MZM0 1159 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 SLC46A3Q7Z3Q1 461 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 GALNT10Q86SR1 603 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 IQCHQ86VS3 1027 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 RAB43Q86YS6 212 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 NPAS3Q8IXF0 933 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 CFAP52Q8N1V2 620 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 CHST14Q8NCH0 376 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 ZNF675Q8TD23 568 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 SMARCD2Q92925 531 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 SPSB4Q96A44 273 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 FBXO17Q96EF6 278 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 GPR137Q96N19 417 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 COL21A1Q96P44 957 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 TRIB3Q96RU7 358 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 SDHCQ99643 169 aaPredicted RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 INPP5KQ9BT40 448 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 GTPBP2Q9BX10 602 aaKnown RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 POLDIP3Q9BY77 421 aaKnown RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 ELOVL6Q9H5J4 265 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 ZNF552Q9H707 407 aaPredicted RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 IFT46Q9NQC8 304 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 DYRK4Q9NR20 520 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 ZCCHC3Q9NUD5 404 aaKnown RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 MTCH1Q9NZJ7 389 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 TCF20Q9UGU0 1960 aaKnown RBP5.08□□□□□ -1.6
CKAP5-212ENST00000533413 GLS2Q9UI32 602 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 NEUROG3Q9Y4Z2 214 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 PCDHGC4Q9Y5F7 938 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 RAI2Q9Y5P3 530 aa5.08□□□□□ -1.6
CKAP5-212ENST00000533413 TRAV19A0A0A6YYK7 116 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 F8W036 122 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CLIC1O00299 241 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 RGS5O15539 181 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TNFSF14O43557 240 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 LRATO95237 230 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CLDN9O95484 217 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CPSF4O95639 269 aaKnown RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 VIPP01282 170 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 C1QBP02746 253 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 F11P03951 625 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SRFP11831 508 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 RPA2P15927 270 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TACR2P21452 398 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 HLA-DMAP28067 261 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 C21orf33P30042 268 aaPredicted RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 THBS2P35442 1172 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 IDH2P48735 452 aaKnown RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SPCS3P61009 180 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SPIBQ01892 262 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CACNG1Q06432 222 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 PCDH1Q08174 1060 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 ARHGEF7Q14155 803 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 VMACQ2NL98 169 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TTLL9Q3SXZ7 439 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 MOGAT2Q3SYC2 334 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 NKAIN1Q4KMZ8 207 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 LRIF1Q5T3J3 769 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 NXNL2Q5VZ03 156 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 LRRC66Q68CR7 880 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 ADNP2Q6IQ32 1131 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CERS6Q6ZMG9 384 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 DPY19L3Q6ZPD9 716 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 FAM122BQ7Z309 247 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TRMT11Q7Z4G4 463 aaKnown RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TRIM46Q7Z4K8 759 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 VTCN1Q7Z7D3 282 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 KLBQ86Z14 1044 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 OR52J3Q8NH60 311 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 FGF13Q92913 245 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TMCO6Q96DC7 493 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 HSH2DQ96JZ2 352 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 MYADMQ96S97 322 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 ASCL2Q99929 193 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 VRK1Q99986 396 aaPredicted RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CCDC32Q9BV29 185 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CDADC1Q9BWV3 514 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SLC29A3Q9BZD2 475 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CIPCQ9C0C6 399 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 OR51E2Q9H255 320 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 CRISPLD1Q9H336 500 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 MCCC2Q9HCC0 563 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 IL26Q9NPH9 171 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 GKN1Q9NS71 199 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SLCO1C1Q9NYB5 712 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 GPN3Q9UHW5 284 aaPredicted RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 PSORS1C1Q9UIG5 152 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 ATXN7L1Q9ULK2 861 aaPredicted RBP5.07□□□□□ -1.6
CKAP5-212ENST00000533413 STARD10Q9Y365 291 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 SLC22A7Q9Y694 548 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 KMT2EQ8IZD2 1858 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 LAMA3Q16787 3333 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 TRBV5-3A0A0A0MS03 114 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 A0A0D9SEW6 157 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 A0A1B0GVM2 712 aa5.07□□□□□ -1.6
CKAP5-212ENST00000533413 RPS10-NUDT3A0A1W2PQS6 291 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms