RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 MAPK3P27361 379 aaPredicted RBP8.8□□□□□ -1
BDNF-216ENST00000532997 AHRP35869 848 aa8.8□□□□□ -1
BDNF-216ENST00000532997 NUP62P37198 522 aaPredicted RBP8.8□□□□□ -1
BDNF-216ENST00000532997 MC3RP41968 323 aa8.8□□□□□ -1
BDNF-216ENST00000532997 MAZP56270 477 aaKnown RBP8.8□□□□□ -1
BDNF-216ENST00000532997 NRG3P56975 720 aa8.8□□□□□ -1
BDNF-216ENST00000532997 BTN3A2P78410 334 aa8.8□□□□□ -1
BDNF-216ENST00000532997 GALEQ14376 348 aa8.8□□□□□ -1
BDNF-216ENST00000532997 FLYWCH1Q4VC44 716 aa8.8□□□□□ -1
BDNF-216ENST00000532997 TOR2AQ5JU69 321 aa8.8□□□□□ -1
BDNF-216ENST00000532997 FRRS1Q6ZNA5 592 aa8.8□□□□□ -1
BDNF-216ENST00000532997 BTN2A1Q7KYR7 527 aa8.8□□□□□ -1
BDNF-216ENST00000532997 GLCCI1Q86VQ1 547 aa8.8□□□□□ -1
BDNF-216ENST00000532997 OOSP2Q86WS3 158 aa8.8□□□□□ -1
BDNF-216ENST00000532997 ACOT4Q8N9L9 421 aa8.8□□□□□ -1
BDNF-216ENST00000532997 OR2L5Q8NG80 312 aa8.8□□□□□ -1
BDNF-216ENST00000532997 OR4K14Q8NGD5 310 aa8.8□□□□□ -1
BDNF-216ENST00000532997 GIMAP1Q8WWP7 306 aa8.8□□□□□ -1
BDNF-216ENST00000532997 PIGKQ92643 395 aa8.8□□□□□ -1
BDNF-216ENST00000532997 SAGE1Q9NXZ1 904 aa8.8□□□□□ -1
BDNF-216ENST00000532997 UPB1Q9UBR1 384 aa8.8□□□□□ -1
BDNF-216ENST00000532997 CAMK2AQ9UQM7 478 aa8.8□□□□□ -1
BDNF-216ENST00000532997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 SLC9B1P1A6NJY1 282 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SOCS6O14544 535 aa8.79□□□□□ -1
BDNF-216ENST00000532997 GAAP10253 952 aa8.79□□□□□ -1
BDNF-216ENST00000532997 ADRB3P13945 408 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SOX18P35713 384 aa8.79□□□□□ -1
BDNF-216ENST00000532997 RAG2P55895 527 aa8.79□□□□□ -1
BDNF-216ENST00000532997 PCBP4P57723 403 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 CCDC157Q569K6 752 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TEX261Q6UWH6 196 aa8.79□□□□□ -1
BDNF-216ENST00000532997 IL20RBQ6UXL0 311 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TMC8Q8IU68 726 aa8.79□□□□□ -1
BDNF-216ENST00000532997 GPR135Q8IZ08 494 aa8.79□□□□□ -1
BDNF-216ENST00000532997 ABHD4Q8TB40 342 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TMEM239Q8WW34 195 aa8.79□□□□□ -1
BDNF-216ENST00000532997 RNF170Q96K19 258 aa8.79□□□□□ -1
BDNF-216ENST00000532997 DPH1Q9BZG8 443 aa8.79□□□□□ -1
BDNF-216ENST00000532997 EVA1AQ9H8M9 152 aa8.79□□□□□ -1
BDNF-216ENST00000532997 MKKSQ9NPJ1 570 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 IL20RAQ9UHF4 553 aa8.79□□□□□ -1
BDNF-216ENST00000532997 ZNF443Q9Y2A4 671 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 SLC35A3Q9Y2D2 325 aa8.79□□□□□ -1
BDNF-216ENST00000532997 U3KQ87 197 aa8.79□□□□□ -1
BDNF-216ENST00000532997 FAM183AA6NL82 134 aa8.79□□□□□ -1
BDNF-216ENST00000532997 GATBO75879 557 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 ASGR2P07307 311 aa8.79□□□□□ -1
BDNF-216ENST00000532997 POLR2CP19387 275 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 SLC6A1P30531 599 aa8.79□□□□□ -1
BDNF-216ENST00000532997 EVI2BP34910 448 aa8.79□□□□□ -1
BDNF-216ENST00000532997 BLVRAP53004 296 aa8.79□□□□□ -1
BDNF-216ENST00000532997 PRDX1Q06830 199 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 CCNJQ5T5M9 372 aa8.79□□□□□ -1
BDNF-216ENST00000532997 FAM129CQ86XR2 697 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TMIEQ8NEW7 156 aa8.79□□□□□ -1
BDNF-216ENST00000532997 RERGQ96A58 199 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 SLC22A18Q96BI1 424 aa8.79□□□□□ -1
BDNF-216ENST00000532997 CCDC120Q96HB5 630 aa8.79□□□□□ -1
BDNF-216ENST00000532997 PLA2G12AQ9BZM1 189 aa8.79□□□□□ -1
BDNF-216ENST00000532997 UBQLN3Q9H347 655 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SEMA4GQ9NTN9 838 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SH2B3Q9UQQ2 575 aa8.79□□□□□ -1
BDNF-216ENST00000532997 EXOGQ9Y2C4 368 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TMPRSS11DO60235 418 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TOXO94900 526 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TFP02787 698 aa8.79□□□□□ -1
BDNF-216ENST00000532997 CHRM4P08173 479 aa8.79□□□□□ -1
BDNF-216ENST00000532997 ACADLP28330 430 aa8.79□□□□□ -1
BDNF-216ENST00000532997 NDUFS1P28331 727 aa8.79□□□□□ -1
BDNF-216ENST00000532997 STARP49675 285 aa8.79□□□□□ -1
BDNF-216ENST00000532997 RAP2BP61225 183 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SHC2P98077 582 aa8.79□□□□□ -1
BDNF-216ENST00000532997 AMZ1Q400G9 498 aa8.79□□□□□ -1
BDNF-216ENST00000532997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.79□□□□□ -1
BDNF-216ENST00000532997 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.79□□□□□ -1
BDNF-216ENST00000532997 SIAH3Q8IW03 269 aa8.79□□□□□ -1
BDNF-216ENST00000532997 OR6V1Q8N148 313 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SLC2A12Q8TD20 617 aa8.79□□□□□ -1
BDNF-216ENST00000532997 C4orf36Q96KX1 117 aa8.79□□□□□ -1
BDNF-216ENST00000532997 CNN2Q99439 309 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TMEM168Q9H0V1 697 aa8.79□□□□□ -1
BDNF-216ENST00000532997 HINT3Q9NQE9 182 aaKnown RBP8.79□□□□□ -1
BDNF-216ENST00000532997 RNF186Q9NXI6 227 aa8.79□□□□□ -1
BDNF-216ENST00000532997 PCDH10Q9P2E7 1040 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SLC23A1Q9UHI7 598 aa8.79□□□□□ -1
BDNF-216ENST00000532997 GNG8Q9UK08 70 aa8.79□□□□□ -1
BDNF-216ENST00000532997 SCN8AQ9UQD0 1980 aa8.79□□□□□ -1
BDNF-216ENST00000532997 TRBV2A0A0J9YWF9 115 aa8.78□□□□□ -1
BDNF-216ENST00000532997 CHP2O43745 196 aa8.78□□□□□ -1
BDNF-216ENST00000532997 DRD5P21918 477 aa8.78□□□□□ -1
BDNF-216ENST00000532997 SKP1P63208 163 aa8.78□□□□□ -1
BDNF-216ENST00000532997 ZNF155Q12901 538 aaPredicted RBP8.78□□□□□ -1
BDNF-216ENST00000532997 NOGQ13253 232 aa8.78□□□□□ -1
BDNF-216ENST00000532997 TCEA2Q15560 299 aa8.78□□□□□ -1
BDNF-216ENST00000532997 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.78□□□□□ -1
BDNF-216ENST00000532997 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
BDNF-216ENST00000532997 CD200R1LQ6Q8B3 271 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms