RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 WDR1O75083 606 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 TOXO94900 526 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 AGR2O95994 175 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 CHRM4P08173 479 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 GLI4P10075 376 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 BMP2P12643 396 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 NCF2P19878 526 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 ATP6V1C1P21283 382 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 CHMP24386 653 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 PSMA4P25789 261 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 MSX1P28360 303 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 STARP49675 285 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 KHKP50053 298 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 LHX2P50458 406 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 RNF144AP50876 292 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 NUP107P57740 925 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 TXNL4AP83876 142 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF117Q03924 483 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 CHRNEQ04844 493 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.394e-13■□□□□ 10.4
TSPAN4-220ENST00000532375 SYPL1Q16563 259 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 GLYR1Q49A26 553 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 MTFR2Q6P444 385 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 MTERF4Q7Z6M4 381 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 ADGRE4PQ86SQ3 457 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 RETREG3Q86VR2 466 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 OR14L1PQ8NHC6 308 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 TRNT1Q96Q11 434 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 TTYH2Q9BSA4 534 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 RUBCNLQ9H714 662 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 DTNAQ9Y4J8 743 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 OR2M5A3KFT3 312 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 SERINC4A6NH21 518 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 NR5A2O00482 541 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 SCDO00767 359 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 KIAA0513O60268 411 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 TNFRSF21O75509 655 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 KRT75O95678 551 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 HOXD4P09016 255 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 LINGO3P0C6S8 592 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ETFAP13804 333 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 HK1P19367 917 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 AGAP20933 346 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ADH7P40394 386 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ARFIP2P53365 341 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 CLDN18P56856 261 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 GANABQ14697 944 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 GPR68Q15743 365 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 NDUFAF6Q330K2 333 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 C6orf10Q5SRN2 563 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 PDZK1Q5T2W1 519 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 C1orf185Q5T7R7 199 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 RPTNQ6XPR3 784 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 C16orf62Q7Z3J2 963 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 IFNEQ86WN2 208 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 MISPQ8IVT2 679 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 DPP10Q8N608 796 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 OR5M1Q8NGP8 315 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 POC1BQ8TC44 478 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 TSPEARQ8WU66 669 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 C10orf82Q8WW14 230 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 RSPO3Q9BXY4 272 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 PTGES2Q9H7Z7 377 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 SAR1AQ9NR31 198 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 SUCOQ9UBS9 1254 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 TRIM33Q9UPN9 1127 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 LIPT1Q9Y234 373 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 RPH3AQ9Y2J0 694 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
TSPAN4-220ENST00000532375 INTS1Q8N201 2190 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 A1L4Q6 167 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 CLIC1O00299 241 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 EFNA2O43921 213 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 H6PDO95479 791 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 EPPINO95925 133 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 NUDT7P0C024 238 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 GABRA1P14867 456 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF708P17019 499 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 RPS4Y1P22090 263 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 TCEA1P23193 301 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 PMPCAQ10713 525 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms