RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 TEX37Q96LM6 180 aa16.3■□□□□ 0.2
SCN4B-205ENST00000531550 PIGQQ9BRB3 760 aa16.3■□□□□ 0.2
SCN4B-205ENST00000531550 KLRF1Q9NZS2 232 aa16.3■□□□□ 0.2
SCN4B-205ENST00000531550 EXO1Q9UQ84 846 aaKnown RBP16.3■□□□□ 0.2
SCN4B-205ENST00000531550 NUP214P35658 2090 aaPredicted RBP16.3■□□□□ 0.2
SCN4B-205ENST00000531550 TLN2Q9Y4G6 2542 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 COL6A5A8TX70 2615 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 HCRTR2O43614 444 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 TBX19O60806 448 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CRLF1O75462 422 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CBR3O75828 277 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 NT5EP21589 574 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 IL12AP29459 219 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 RPL3P39023 403 aaKnown RBP16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CD79BP40259 229 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 NME5P56597 212 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CLDN18P56856 261 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 C2orf80Q0P641 193 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 SNTA1Q13424 505 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 DPY19L1Q2PZI1 675 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 VWA1Q6PCB0 445 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 BLOC1S3Q6QNY0 202 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 NUP54Q7Z3B4 507 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 OR9I1Q8NGQ6 314 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 RP9Q8TA86 221 aaKnown RBP16.29■□□□□ 0.2
SCN4B-205ENST00000531550 STARD4Q96DR4 205 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CMTM5Q96DZ9 223 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 OMA1Q96E52 524 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 ZNF764Q96H86 408 aaPredicted RBP16.29■□□□□ 0.2
SCN4B-205ENST00000531550 ZBTB18Q99592 522 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 TAS2R10Q9NYW0 307 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 CCDC167Q9P0B6 97 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 ATP6V1HQ9UI12 483 aa16.29■□□□□ 0.2
SCN4B-205ENST00000531550 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 UBOX5O94941 541 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 CRHP06850 196 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 COX4I1P13073 169 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 ZNF708P17019 499 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 S1PR1P21453 382 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 LOXP28300 417 aaPredicted RBP16.28■□□□□ 0.2
SCN4B-205ENST00000531550 UGT2B10P36537 528 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 POLR2JP52435 117 aaKnown RBP16.28■□□□□ 0.2
SCN4B-205ENST00000531550 PLCXD2Q0VAA5 305 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 HEPACAMQ14CZ8 416 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 AAGABQ6PD74 315 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 ZNF474Q6S9Z5 364 aaPredicted RBP16.28■□□□□ 0.2
SCN4B-205ENST00000531550 ZNF550Q7Z398 422 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 P4HA3Q7Z4N8 544 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 R3HCC1LQ7Z5L2 792 aaKnown RBP16.28■□□□□ 0.2
SCN4B-205ENST00000531550 CNEP1R1Q8N9A8 125 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 OR4K14Q8NGD5 310 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 CLHC1Q8NHS4 586 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 NSL1Q96IY1 281 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 FAIM2Q9BWQ8 316 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 ITPAQ9BY32 194 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 REEP4Q9H6H4 257 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 EHD3Q9NZN3 535 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 DSCAMO60469 2012 aa16.28■□□□□ 0.2
SCN4B-205ENST00000531550 CHD3Q12873 2000 aaKnown RBP16.28■□□□□ 0.2
SCN4B-205ENST00000531550 SCAMP2O15127 329 aaKnown RBP16.27■□□□□ 0.2
SCN4B-205ENST00000531550 UGT2B11O75310 529 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 IL6P05231 212 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 IL3P08700 152 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 POU2F1P14859 743 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 DDX5P17844 614 aaKnown RBP16.27■□□□□ 0.2
SCN4B-205ENST00000531550 SRD5A2P31213 254 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 HPCAL1P37235 193 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 XKP51811 444 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 KRTAP1-1Q07627 177 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 PDE7AQ13946 482 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 CYLC2Q14093 348 aaPredicted RBP16.27■□□□□ 0.2
SCN4B-205ENST00000531550 KRTCAP2Q8N6L1 136 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 IGFBPL1Q8WX77 278 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 COQ8BQ96D53 544 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 SPDL1Q96EA4 605 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 SFXN2Q96NB2 322 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 PRPF18Q99633 342 aaKnown RBP16.27■□□□□ 0.2
SCN4B-205ENST00000531550 OPN3Q9H1Y3 402 aaPredicted RBP16.27■□□□□ 0.2
SCN4B-205ENST00000531550 SLC52A3Q9NQ40 469 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 TAGLN3Q9UI15 199 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 PCDHA9Q9Y5H5 950 aa16.27■□□□□ 0.2
SCN4B-205ENST00000531550 C1orf226A1L170 272 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 ACOX3O15254 700 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 AKAP10O43572 662 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 T-ENOLP0DO92 83 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 CPMP14384 443 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 NID1P14543 1247 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 DDCP20711 480 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 BNIP1Q12981 228 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 STX5Q13190 355 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 OR2A2Q6IF42 318 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 BTLAQ7Z6A9 289 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 PLCZ1Q86YW0 608 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 NATD1Q8N6N6 113 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 OR8J2Q8NGG1 315 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 CDC26Q8NHZ8 85 aa16.26■□□□□ 0.19
SCN4B-205ENST00000531550 ZC3HAV1LQ96H79 300 aaKnown RBP16.26■□□□□ 0.19
SCN4B-205ENST00000531550 LCORQ96JN0 433 aaPredicted RBP16.26■□□□□ 0.19
SCN4B-205ENST00000531550 TAS2R7Q9NYW3 318 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms