RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 IL1BP01584 269 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 MT-ND1P03886 318 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SERPING1P05155 500 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ABHD2P08910 425 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 OR52Z1P0C646 297 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 UQCRFS1P1P0C7P4 283 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 HSMCR30P0CW71 290 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ACP1P24666 158 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 DNASE1P24855 282 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CD27P26842 260 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 GNA11P29992 359 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CCND3P30281 292 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 HMOX2P30519 316 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SERPINB6P35237 376 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 FEN1P39748 380 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SMSP52788 366 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PRMT2P55345 433 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CLDN8P56748 225 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PRPS1P60891 318 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SRP54P61011 504 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 RPL23AP62750 156 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SRPXP78539 464 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PLOD1Q02809 727 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ACSM1Q08AH1 577 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 RASGEF1BQ0VAM2 473 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ART3Q13508 389 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 GPR176Q14439 515 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CEBPEQ15744 281 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SLC36A3Q495N2 470 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 EPC2Q52LR7 807 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PDZK1Q5T2W1 519 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 C1orf94Q6P1W5 598 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SCYL2Q6P3W7 929 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 MOXD1Q6UVY6 613 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SCARA5Q6ZMJ2 495 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 FRA10AC1Q70Z53 315 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SLC24A5Q71RS6 500 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 FAM122BQ7Z309 247 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 VTCN1Q7Z7D3 282 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 TRIM69Q86WT6 500 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 MISPQ8IVT2 679 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CCDC60Q8IWA6 550 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 C4orf19Q8IY42 314 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 TIGD4Q8IY51 512 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 GPR65Q8IYL9 337 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 UBE2J2Q8N2K1 259 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF397Q8NF99 534 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 UBA3Q8TBC4 463 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SLC2A14Q8TDB8 520 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ING5Q8WYH8 240 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PIK3R3Q92569 461 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 P3H4Q92791 437 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SPSB1Q96BD6 273 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SPDL1Q96EA4 605 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CEP170P1Q96L14 293 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 MUS81Q96NY9 551 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 INTS14Q96SY0 518 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PCDHB18PQ96TA0 734 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 FEVQ99581 238 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CNPY3Q9BT09 278 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PARD6BQ9BYG5 372 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 DERL2Q9GZP9 239 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF350Q9GZX5 532 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 DNTTIP1Q9H147 329 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SAV1Q9H4B6 383 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SLC38A10Q9HBR0 1119 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 FAM212BQ9NTI7 297 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 DNAJC17Q9NVM6 304 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SPG21Q9NZD8 308 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 GMEB2Q9UKD1 530 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ADAM28Q9UKQ2 775 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 ABT1Q9ULW3 272 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 USP16Q9Y5T5 823 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CACNG2Q9Y698 323 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 TEX264Q9Y6I9 313 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 NCAPD2Q15021 1401 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PHLPP2Q6ZVD8 1323 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 POLR3AO14802 1390 aaPredicted RBP2.92□□□□□ -1.94
PTPRK-220ENST00000531466 TRPC5OSA6NMA1 111 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 E5RI56 91 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 E7ESA3 106 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 NPIPA2E9PIF3 369 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 H0YJX3 145 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 LGALS8O00214 317 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 PGRMC1O00264 195 aaKnown RBP2.92□□□□□ -1.94
PTPRK-220ENST00000531466 CABYRO75952 493 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 PGLSO95336 258 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 RAB3DO95716 219 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 SERPINA3P01011 423 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 IGHV2-70P01814 119 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 MBP02144 154 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 PLEKP08567 350 aaPredicted RBP2.92□□□□□ -1.94
PTPRK-220ENST00000531466 SNRPAP09012 282 aaKnown RBP2.92□□□□□ -1.94
PTPRK-220ENST00000531466 SLC2A3P11169 496 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 MPZP25189 248 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 CD40LGP29965 261 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 PKLRP30613 574 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 PRKCIP41743 596 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 GPR4P46093 362 aa2.92□□□□□ -1.94
PTPRK-220ENST00000531466 CASP4P49662 377 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms