RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 HOXB13Q92826 284 aaPredicted RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TM9SF2Q99805 663 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 MIR1-1HGQ9H1L0 117 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 HINT3Q9NQE9 182 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 EVA1BQ9NVM1 165 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 YARS2Q9Y2Z4 477 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 REV3LO60673 3130 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SEC14L5O43304 696 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 COQ9O75208 318 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 SEMA4FO95754 770 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 IL7P13232 177 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 PAICSP22234 425 aaKnown RBP15.98■□□□□ 0.15
BRCA2-204ENST00000530893 HTR2AP28223 471 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
BRCA2-204ENST00000530893 RAB38P57729 211 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 SHC2P98077 582 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 MGAT2Q10469 447 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 FAM131AQ6UXB0 335 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 ARIH2OSQ8N7S6 290 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 RPLP0P6Q8NHW5 317 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 SECISBP2Q96T21 854 aaKnown RBP15.98■□□□□ 0.15
BRCA2-204ENST00000530893 MIXL1Q9H2W2 232 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 TOR4AQ9NXH8 423 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 CSNK1G3Q9Y6M4 447 aa15.98■□□□□ 0.15
BRCA2-204ENST00000530893 TCRBV21S2A2A0A5A6 115 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 FABP12A6NFH5 140 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 BHLHE40O14503 412 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 NKX2-2O95096 273 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 LYPD3O95274 346 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 SLC35E2P0CK97 266 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 LSSP48449 732 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 PPP3R1P63098 170 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 ID2Q02363 134 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
BRCA2-204ENST00000530893 AGAP6Q5VW22 663 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 PRSS41Q7RTY9 318 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 OOSP2Q86WS3 158 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 CPOQ8IVL8 374 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 LNX2Q8N448 690 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 AGAP4Q96P64 663 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF559Q9BR84 538 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 KCNE5Q9UJ90 142 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 FAM86C2PA6NEL3 165 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 ZGLP1P0C6A0 271 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 CLEC2LP0C7M8 214 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 PRG2P13727 222 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 PVRP15151 417 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 GABRG2P18507 467 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 CASP3P42574 277 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 RNF144AP50876 292 aaPredicted RBP15.97■□□□□ 0.15
BRCA2-204ENST00000530893 CTBP2P56545 445 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 GARNL3Q5VVW2 1013 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF322Q6U7Q0 402 aaPredicted RBP15.97■□□□□ 0.15
BRCA2-204ENST00000530893 MEPCEQ7L2J0 689 aaKnown RBP15.97■□□□□ 0.15
BRCA2-204ENST00000530893 SLC43A2Q8N370 569 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM52Q8NDY8 209 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 OR13H1Q8NG92 308 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 DNAJA4Q8WW22 397 aaPredicted RBP15.97■□□□□ 0.15
BRCA2-204ENST00000530893 DIRAS2Q96HU8 199 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 ABHD8Q96I13 439 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 NECTIN4Q96NY8 510 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 DPH1Q9BZG8 443 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 INPP5EQ9NRR6 644 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 MMP17Q9ULZ9 603 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 MED31Q9Y3C7 131 aa15.97■□□□□ 0.15
BRCA2-204ENST00000530893 PEX12O00623 359 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 CASKO14936 926 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 LALBAP00709 142 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 IFI30P13284 250 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 TBXA2RP21731 343 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 DRD5P21918 477 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 BMP8BP34820 402 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 GABRA3P34903 492 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 TGM4P49221 684 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 CCR5P51681 352 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 ASAH1Q13510 395 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 BAK1Q16611 211 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 AMZ1Q400G9 498 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 PDZK1Q5T2W1 519 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF544Q6NX49 715 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 NIPAL3Q6P499 406 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 METAP1DQ6UB28 335 aaPredicted RBP15.96■□□□□ 0.15
BRCA2-204ENST00000530893 WDR88Q6ZMY6 472 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.15
BRCA2-204ENST00000530893 BMP8AQ7Z5Y6 402 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 NRARPQ7Z6K4 114 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 GRAMD2AQ8IUY3 354 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 SLC22A18ASQ8N1D0 253 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 ACBD7Q8N6N7 88 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 BBS1Q8NFJ9 593 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 SLC37A2Q8TED4 501 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 SPRYD4Q8WW59 207 aaPredicted RBP15.96■□□□□ 0.15
BRCA2-204ENST00000530893 PATE1Q8WXA2 126 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 CCDC3Q9BQI4 270 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 RERGLQ9H628 205 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM27Q9HBJ8 222 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 CMC2Q9NRP2 79 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 CLDND1Q9NY35 253 aa15.96■□□□□ 0.15
BRCA2-204ENST00000530893 USP36Q9P275 1121 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms