RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 LRTOMTQ8WZ04 291 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SH3YL1Q96HL8 342 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SGCZQ96LD1 299 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ARHGDIGQ99819 225 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RSPO3Q9BXY4 272 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 AMBRA1Q9C0C7 1298 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 EVA1AQ9H8M9 152 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CPNE5Q9HCH3 593 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 IL1RAPQ9NPH3 570 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RYDENQ9NUL5 291 aaKnown RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ABCG2Q9UNQ0 655 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SLC35A3Q9Y2D2 325 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CARD8Q9Y2G2 431 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CHST2Q9Y4C5 530 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 KCNMB2Q9Y691 235 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 A0A1W2PQD3 144 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ALG1L2C9J202 215 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 G3V3Y1 287 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CLOCKO15516 846 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF264O43296 627 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HCRTR2O43614 444 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 BCAS1O75363 584 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DIRAS1O95057 198 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 WDPCPO95876 746 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CST1P01037 141 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LDLRP01130 860 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 P04436 131 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ITPKBP27987 946 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 IFNA8P32881 189 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CD96P40200 585 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ADH7P40394 386 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CASP3P42574 277 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CCR4P51679 360 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UCNP55089 124 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TMPRSS3P57727 454 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 VLDLRP98155 873 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TLE3Q04726 772 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TUBA3CQ13748 450 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CD226Q15762 336 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NRF1Q16656 503 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NDUFAF6Q330K2 333 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PRAMEF20Q5VT98 475 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FBXW10Q5XX13 1052 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 BICRALQ6AI39 1079 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SPINK14Q6IE38 97 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR5M10Q6IEU7 315 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SLC30A6Q6NXT4 461 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TUBA3EQ6PEY2 450 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UNQ6494/PRO21346Q6UXR6 183 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ERMP1Q7Z2K6 904 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PIWIL3Q7Z3Z3 882 aaKnown RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 AMIGO2Q86SJ2 522 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MISPQ8IVT2 679 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF440Q8IYI8 595 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PQLC1Q8N2U9 271 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FDCSPQ8NFU4 85 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR4D11Q8NGI4 311 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR6T1Q8NGN1 323 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 APOBEC4Q8WW27 367 aaKnown RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C7orf34Q96L11 122 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF347Q96SE7 839 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SECISBP2Q96T21 854 aaKnown RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MCHR1Q99705 422 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PKP2Q99959 881 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 WFDC6Q9BQY6 131 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF559Q9BR84 538 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LAT2Q9GZY6 243 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SEMA6AQ9H2E6 1030 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TMEM27Q9HBJ8 222 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CTPS2Q9NRF8 586 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SACM1LQ9NTJ5 587 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DNAJB12Q9NXW2 375 aaKnown RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CNIH4Q9P003 139 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NDUFAF4Q9P032 175 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PPP4R1LQ9P1A2 415 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LRFN1Q9P244 771 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DNAJB9Q9UBS3 223 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NKX1-2Q9UD57 310 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CHCHD2Q9Y6H1 151 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SCN2AQ99250 2005 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FER1L5A0AVI2 2057 aa7.79□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CEP250Q9BV73 2442 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CPSF4LA6NMK7 179 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C17orf51A8MQB3 221 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 J3KTA2 159 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OIP5O43482 229 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 EIF4E2O60573 245 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DEAF1O75398 565 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NUDT14O95848 222 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SEMG1P04279 462 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CAPNS1P04632 268 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LINGO3P0C6S8 592 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CCL3P10147 92 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms