RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 UAP1Q16222 522 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 ELOA3BQ3SY89 546 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 TECRLQ5HYJ1 363 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 TCHHL1Q5QJ38 904 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 CPTPQ5TA50 214 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 PRR14LQ5THK1 2151 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 MFSD12Q6NUT3 480 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 TFAP2EQ6VUC0 442 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 BHLHA15Q7RTS1 189 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 MMGT1Q8N4V1 131 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 ELOA3Q8NG57 546 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 FAM168AQ92567 244 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 SLC9A6Q92581 669 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 MRRFQ96E11 262 aaKnown RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 RADILQ96JH8 1075 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 ADGRG7Q96K78 797 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 NSUN5Q96P11 429 aaKnown RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 RTN4RQ9BZR6 473 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 DPH5Q9H2P9 285 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 TMEM185BQ9H7F4 350 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 GP6Q9HCN6 339 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 KCNS2Q9ULS6 477 aa7.99□□□□□ -1.13
VPS11-203ENST00000529545 C19orf53Q9UNZ5 99 aaPredicted RBP7.99□□□□□ -1.13
VPS11-203ENST00000529545 A0A0J9YW62 118 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 C7orf72A4D263 438 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 TTC36A6NLP5 189 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 ABCD4O14678 606 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 RAMP1O60894 148 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 PRKD3O94806 890 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 JUNP05412 331 aaKnown RBP7.98□□□□□ -1.13
VPS11-203ENST00000529545 CSF3P09919 207 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 BMP4P12644 408 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 HPGDP15428 266 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 ZNF16P17020 682 aaPredicted RBP7.98□□□□□ -1.13
VPS11-203ENST00000529545 PTNP21246 168 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 USF1P22415 310 aaPredicted RBP7.98□□□□□ -1.13
VPS11-203ENST00000529545 GABRA3P34903 492 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 MAGEA4P43358 317 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 GSTM5P46439 218 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 NCBP2P52298 156 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS11-203ENST00000529545 ACSM2AQ08AH3 577 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 SQLEQ14534 574 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 GRAMD1BQ3KR37 738 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 SPIN4Q56A73 249 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 ACSM2BQ68CK6 577 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 FAM166AQ6J272 317 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 LETMD1Q6P1Q0 360 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 TMEM107Q6UX40 140 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 TDRPQ86YL5 185 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 CREG2Q8IUH2 290 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 TUSC5Q8IXB3 177 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 FBXL14Q8N1E6 418 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 DEPDC4Q8N2C3 294 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 OR2W6PQ8NHA6 318 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 ACTRT2Q8TDY3 377 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 C16orf78Q8WTQ4 265 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 PROX1Q92786 737 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 CPNE4Q96A23 557 aaPredicted RBP7.98□□□□□ -1.13
VPS11-203ENST00000529545 KLHL15Q96M94 604 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 RNF145Q96MT1 663 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 GPR78Q96P69 363 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 HBEGFQ99075 208 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 ERP44Q9BS26 406 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 CHODLQ9H9P2 273 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 CBLN4Q9NTU7 201 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 KLHL13Q9P2N7 655 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 DMGDHQ9UI17 866 aaKnown RBP7.98□□□□□ -1.13
VPS11-203ENST00000529545 POU2F3Q9UKI9 436 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 GRID1Q9ULK0 1009 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 MGAT4BQ9UQ53 548 aa7.98□□□□□ -1.13
VPS11-203ENST00000529545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.98□□□□□ -1.136e-15■■■■■ 55.6
VPS11-203ENST00000529545 YLPM1P49750 1951 aaKnown RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 A0A096LNT2 108 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 A0A1W2PRB8 838 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 A6NJY4 79 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 GJE1A6NN92 205 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 MYO1GB0I1T2 1018 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 TMEM229AB2RXF0 380 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 SHISA9B4DS77 424 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 MANBAO00462 879 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ULK1O75385 1050 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 OR4F21O95013 312 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 NTN1O95631 604 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 PGRP06401 933 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 YES1P07947 543 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ANXA4P09525 319 aaPredicted RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 CTAGE8P0CG41 777 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 HMOX2P30519 316 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 NTSP30990 170 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 TTKP33981 857 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 SFTPDP35247 375 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 EIF1P41567 113 aaKnown RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 CDH13P55290 713 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 IRX1P78414 480 aaPredicted RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 CAV1Q03135 178 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 RASA2Q15283 850 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ZNF239Q16600 458 aaKnown RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 TSNAXIP1Q2TAA8 658 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms