RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 KDM4EB2RXH2 506 aaPredicted RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 LINC01565O15544 149 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 PRICKLE3O43900 615 aaPredicted RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 SAGP10523 405 aaPredicted RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 PEPDP12955 493 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 NT5EP21589 574 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 GABRA5P31644 462 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 SRP9P49458 86 aaKnown RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 FXYD6P3P58550 94 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 PPP1CAP62136 330 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 FZD5Q13467 585 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 DEFB110Q30KQ9 67 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 PRRT3Q5FWE3 981 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 LCN1P1Q5VSP4 162 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 PLET1Q6UQ28 207 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF620Q6ZNG0 422 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 KLHL36Q8N4N3 616 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 NATD1Q8N6N6 113 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 CLDN22Q8N7P3 220 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 YIPF7Q8N8F6 280 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 ACOT11Q8WXI4 607 aaPredicted RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 WDFY2Q96P53 400 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 IFT27Q9BW83 186 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 SRMSQ9H3Y6 488 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 NT5DC2Q9H857 520 aa6.94□□□□□ -1.3
C11orf54-207ENST00000528288 EXOSC1Q9Y3B2 195 aaKnown RBP6.94□□□□□ -1.3
C11orf54-207ENST00000528288 TMEM129A0AVI4 362 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 LRRN3E7EW58 273 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 H3BSH0 61 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 J3QLW9 94 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 GTPBP1O00178 669 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 PSMD9O00233 223 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 IMPA2O14732 288 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 CASC3O15234 703 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 PLOD3O60568 738 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 CDC123O75794 336 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF19P17023 458 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 IFNGR2P38484 337 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MAP2K3P46734 347 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MRPL2Q5T653 305 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ESPNLQ6ZVH7 1005 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF438Q7Z4V0 828 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 LRRC25Q8N386 305 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 VWA5B2Q8N398 1253 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 DNAJC5GQ8N7S2 189 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 BMPERQ8N8U9 685 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF485Q8NCK3 441 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 OR2T33Q8NG76 320 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 UPRTQ96BW1 309 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF649Q9BS31 505 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 RSPH9Q9H1X1 276 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 LRRN3Q9H3W5 708 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 EXTL2Q9UBQ6 330 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 HMX3A6NHT5 357 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 HCRTR1O43613 425 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TSC22D2O75157 780 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 RFPL3O75679 317 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 CPMP14384 443 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 NDUFV2P19404 249 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TEAD1P28347 426 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 PBX2P40425 430 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 VASPP50552 380 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ERVK-21P61565 698 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TRA2BP62995 288 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ASAH1Q13510 395 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 DSG2Q14126 1118 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ZNF322Q6U7Q0 402 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 C7orf61Q8IZ16 206 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ASCC1Q8N9N2 400 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MFSD9Q8NBP5 474 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 FANK1Q8TC84 345 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 C10orf90Q96M02 699 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 RIPOR3Q96MK2 946 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MCOLN1Q9GZU1 580 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MOV10Q9HCE1 1003 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 BRWD1Q9NSI6 2320 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TRAV6A0A075B6T7 132 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 OR6C74A6NCV1 312 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 SNTNA6NMZ2 147 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 STK25O00506 426 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 APODP05090 189 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 SYPP08247 313 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 CT62P0C5K7 136 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 COL9A1P20849 921 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 PAICSP22234 425 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 IFNA8P32881 189 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ANXA11P50995 505 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 AGFG1P52594 562 aaKnown RBP6.93□□□□□ -1.3
C11orf54-207ENST00000528288 GNA13Q14344 377 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 NDUFAF6Q330K2 333 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 EOGTQ5NDL2 527 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 LYPD8Q6UX82 237 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TMEM64Q6YI46 380 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 MBOAT2Q6ZWT7 520 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 KRT74Q7RTS7 529 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ASPGQ86U10 573 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 PEX5LQ8IYB4 626 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 ARIH2OSQ8N7S6 290 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 C17orf47Q8NEP4 570 aa6.93□□□□□ -1.3
C11orf54-207ENST00000528288 TTLQ8NG68 377 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms