RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NTN1O95631 604 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 F11P03951 625 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 HIST1H2ABP04908 130 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 IFNGR1P15260 489 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 PBLDP30039 288 aaPredicted RBP11.69□□□□□ -0.54
TSKU-203ENST00000527881 THBS2P35442 1172 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 RPL3P39023 403 aaKnown RBP11.69□□□□□ -0.54
TSKU-203ENST00000527881 ARF5P84085 180 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 ZNF660Q6AZW8 331 aaPredicted RBP11.69□□□□□ -0.54
TSKU-203ENST00000527881 HIST3H2AQ7L7L0 130 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 SVBPQ8N300 66 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 ZFPM2Q8WW38 1151 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 HIST1H2ACQ93077 130 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 ABCG4Q9H172 646 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 OR51V1Q9H2C8 321 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 TDP1Q9NUW8 608 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 SPHK1Q9NYA1 384 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 TAS2R10Q9NYW0 307 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
TSKU-203ENST00000527881 A4GNTQ9UNA3 340 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 NUMA1Q14980 2115 aa11.69□□□□□ -0.54
TSKU-203ENST00000527881 CPSF4LA6NMK7 179 aaKnown RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 SNAI1O95863 264 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 PSEN2P49810 448 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 DLX5P56178 289 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 KLF9Q13886 244 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ACSM3Q53FZ2 586 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 TMEM255AQ5JRV8 349 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 FAM69AQ5T7M9 428 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 RFLNAQ6ZTI6 216 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 SIRT6Q8N6T7 355 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 OR6T1Q8NGN1 323 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 EXOSC8Q96B26 276 aaKnown RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 C11orf49Q9H6J7 331 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 KLK11Q9UBX7 282 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 FLRT2O43155 660 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 FGF18O76093 207 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 PTHLHP12272 177 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 HSD3B2P26439 372 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 KCNJ5P48544 419 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 DYRK1AQ13627 763 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 SLBPQ14493 270 aaKnown RBP eCLIP11.68□□□□□ -0.54
TSKU-203ENST00000527881 ATXN7L3Q14CW9 347 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 ZNF783Q6ZMS7 281 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 CAMKMTQ7Z624 323 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 LRRTM4Q86VH4 590 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 NAXDQ8IW45 347 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 OR5D16Q8NGK9 328 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ABHD4Q8TB40 342 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 LGALS14Q8TCE9 139 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 BCL2L14Q9BZR8 327 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 FN3KQ9H479 309 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ASF1BQ9NVP2 202 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 MBLAC1A4D2B0 266 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 F5H5P2 479 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 PSMA3P25788 255 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 PYCR1P32322 319 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 OR1G1P47890 313 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 BLOC1S1P78537 153 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 E2F1Q01094 437 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ZDHHC20Q5W0Z9 365 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 GLDNQ6ZMI3 551 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 CXorf40BQ96DE9 158 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 NDC1Q9BTX1 674 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 ZNF471Q9BX82 626 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 BRF2Q9HAW0 419 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 PRMT8Q9NR22 394 aaPredicted RBP11.68□□□□□ -0.54
TSKU-203ENST00000527881 DPP7Q9UHL4 492 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 CAMK2AQ9UQM7 478 aa11.68□□□□□ -0.54
TSKU-203ENST00000527881 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 HPP00738 406 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 CLTBP09497 229 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 ATF1P18846 271 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TBXA2RP21731 343 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 CCND3P30281 292 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 CCSMST1Q4G0I0 132 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 CTXN3Q4LDR2 81 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 BEX5Q5H9J7 111 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 SLC25A30Q5SVS4 291 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 AVPI1Q5T686 147 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 ZNF697Q5TEC3 545 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 RAB12Q6IQ22 244 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 PUSL1Q8N0Z8 303 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 TMEM99Q8N816 258 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 POGLUT1Q8NBL1 392 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms