RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SKP1P63208 163 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 CBX3Q13185 183 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 FZD2Q14332 565 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 EXOSC7Q15024 291 aaKnown RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 TMPRSS11FQ6ZWK6 438 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 CXXC5Q7LFL8 322 aaKnown RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 FANK1Q8TC84 345 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 AP3S1Q92572 193 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 TXNDC15Q96J42 360 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 ZNF649Q9BS31 505 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 CEP290O15078 2479 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 KCNK2O95069 426 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 GKN3PP0CG01 181 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 GALP22466 123 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 COL9A2Q14055 689 aaPredicted RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 CRTC2Q53ET0 693 aaPredicted RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 LHFPL3Q86UP9 236 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 GRAMD2AQ8IUY3 354 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 VWA5B2Q8N398 1253 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 LNX2Q8N448 690 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 ARHGEF39Q8N4T4 335 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 FAM181AQ8N9Y4 354 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 TMEM203Q969S6 136 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 TOE1Q96GM8 510 aaKnown RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 LMF2Q9BU23 707 aaKnown RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 DPH1Q9BZG8 443 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 HINT3Q9NQE9 182 aaKnown RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 FBXO34Q9NWN3 711 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 ERVK13-1Q9NX77 482 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 PLEKHB1Q9UF11 243 aaPredicted RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 CAB39Q9Y376 341 aaPredicted RBP14.24□□□□□ -0.13
USH1C-207ENST00000527720 CSNK1G3Q9Y6M4 447 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 XIRP2A4UGR9 3374 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 J3QRE1 110 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 SGK494L7N484 410 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 BHLHE40O14503 412 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 CBX7O95931 251 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 CELA2BP08218 269 aaPredicted RBP14.23□□□□□ -0.13
USH1C-207ENST00000527720 ZGLP1P0C6A0 271 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 IFI30P13284 250 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 CTBP2P56545 445 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 BDH1Q02338 343 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 ZNF155Q12901 538 aaPredicted RBP14.23□□□□□ -0.13
USH1C-207ENST00000527720 HNRNPA0Q13151 305 aaKnown RBP14.23□□□□□ -0.13
USH1C-207ENST00000527720 ZSWIM7Q19AV6 140 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 AMZ1Q400G9 498 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 GARNL3Q5VVW2 1013 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 FIGNL1Q6PIW4 674 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 WDR88Q6ZMY6 472 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 SHFQ7M4L6 423 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 CPOQ8IVL8 374 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 OR4F15Q8NGB8 312 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 ZDHHC1Q8WTX9 485 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 CHAC2Q8WUX2 184 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 SLC35B4Q969S0 331 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 TPK1Q9H3S4 243 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 TMEM27Q9HBJ8 222 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 TNFRSF10DQ9UBN6 386 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 MED31Q9Y3C7 131 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 UNC80Q8N2C7 3258 aa14.23□□□□□ -0.13
USH1C-207ENST00000527720 SHISA7A6NL88 538 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 OR10H2O60403 315 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 RDH16O75452 317 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 HLA-DPB1P04440 258 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 ST6GAL1P15907 406 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 TBXA2RP21731 343 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 ATP6V1E1P36543 226 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 MXD1Q05195 221 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 ZNHIT3Q15649 155 aaPredicted RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 CCBE1Q6UXH8 406 aaPredicted RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 GDPD3Q7L5L3 318 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 LAX1Q8IWV1 398 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 SLC43A2Q8N370 569 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 C19orf47Q8N9M1 422 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 OR52R1Q8NGF1 315 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 HPS1Q92902 700 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 SECISBP2Q96T21 854 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 ASB6Q9NWX5 421 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 GXYLT2A0PJZ3 443 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 C2CD4DB7Z1M9 353 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 SNPHO15079 494 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 SLC2A10O95528 541 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 MAKP20794 623 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 PAICSP22234 425 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 SDC2P34741 201 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 BMP8BP34820 402 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 FXYD6P3P58550 94 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 PPP1CAP62136 330 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 FABP5Q01469 135 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 GPR50Q13585 617 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 COL19A1Q14993 1142 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 ZNF542PQ5EBM4 170 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 DESI1Q6ICB0 168 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 NIPAL3Q6P499 406 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 MEPCEQ7L2J0 689 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 BMP8AQ7Z5Y6 402 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 PARGQ86W56 976 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 SFTPA2Q8IWL1 248 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms