RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 HOXB13Q92826 284 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 GIMAP5Q96F15 307 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 PERPQ96FX8 193 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZNF764Q96H86 408 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 RNF145Q96MT1 663 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 HS3ST6Q96QI5 342 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 TRMOQ9BU70 441 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 TUBB1Q9H4B7 451 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 MED17Q9NVC6 651 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 FBXO34Q9NWN3 711 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 NTMQ9P121 344 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 DNAJC15Q9Y5T4 150 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 SNX8Q9Y5X2 465 aa20.06■□□□□ 0.8
TRAPPC4-208ENST00000527680 NGFRP08138 427 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 POU6F2P78424 691 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 CCNJQ5T5M9 372 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 HBMQ6B0K9 141 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 C20orf204Q6ZNR8 217 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 ESPNLQ6ZVH7 1005 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 STK32CQ86UX6 486 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 MISPQ8IVT2 679 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 HOMEZQ8IX15 550 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 OR2V1Q8NHB1 315 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 B4GALNT2Q8NHY0 566 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 ACTRT2Q8TDY3 377 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 OSTF1Q92882 214 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 CAVIN3Q969G5 261 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 MTERF3Q96E29 417 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 Q96MF0 132 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 NPAS1Q99742 590 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 GLRX2Q9NS18 164 aa20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 ZCCHC3Q9NUD5 404 aaKnown RBP20.05■□□□□ 0.8
TRAPPC4-208ENST00000527680 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 BCKDHAP12694 445 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 PPP3CBP16298 524 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 LCN1P31025 176 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 FRKP42685 505 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 CARD18P57730 90 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 PDE7AQ13946 482 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 PCLAFQ15004 111 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 PLPPR5Q32ZL2 321 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 KANK2Q63ZY3 851 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 ALKBH2Q6NS38 261 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 BEND4Q6ZU67 534 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 PLEKHM3Q6ZWE6 761 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 YTHDF3Q7Z739 585 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 LILRA2Q8N149 483 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 REXO5Q96IC2 774 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 FCRL1Q96LA6 429 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 BDH2Q9BUT1 245 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 BTBD2Q9BX70 525 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 EML4Q9HC35 981 aaKnown RBP20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 TRAF6Q9Y4K3 522 aa20.04■□□□□ 0.8
TRAPPC4-208ENST00000527680 A0A0J9YW62 118 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 TMEM114B3SHH9 223 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 H7C1Q1 480 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 SMAD7O15105 426 aaKnown RBP20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 ADAMDEC1O15204 470 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 SS18L1O75177 396 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 HSPA4LO95757 839 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 NUDT14O95848 222 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 IL11P20809 199 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 ATP6V1C1P21283 382 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 HPCAL1P37235 193 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 LASP1Q14847 261 aaKnown RBP20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 BEX5Q5H9J7 111 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 LRIG3Q6UXM1 1119 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 STAC2Q6ZMT1 411 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 EIF1ADQ8N9N8 165 aaKnown RBP20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 PHOSPHO1Q8TCT1 267 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 TWIST2Q8WVJ9 160 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 FAM120BQ96EK7 910 aaKnown RBP20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 C12orf49Q9H741 205 aa20.03■□□□□ 0.8
TRAPPC4-208ENST00000527680 ROS1P08922 2347 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 TMEM233B4DJY2 109 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 LY6G6DO95868 133 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 HMGN2P05204 90 aaKnown RBP20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 CHRNGP07510 517 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 FGF4P08620 206 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 MAPK1P28482 360 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 SFTPDP35247 375 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 CTU2Q2VPK5 515 aaKnown RBP20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 ARL13AQ5H913 290 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 PRSS57Q6UWY2 283 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 RNF165Q6ZSG1 346 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 WFDC8Q8IUA0 241 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 LRRN4CLQ8ND94 238 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 OR7A2PQ8NGA2 310 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 AGR3Q8TD06 166 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 ROBO4Q8WZ75 1007 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 CDS1Q92903 461 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 ADGRG7Q96K78 797 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 MARK4Q96L34 752 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 TIGARQ9NQ88 270 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 GIN1Q9NXP7 522 aa20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 NUP214P35658 2090 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC4-208ENST00000527680 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC4-208ENST00000527680 C7orf72A4D263 438 aa20.01■□□□□ 0.79
TRAPPC4-208ENST00000527680 PIP5K1BO14986 540 aa20.01■□□□□ 0.79
TRAPPC4-208ENST00000527680 PEX11AO75192 247 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms