RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ATP13A2Q9NQ11 1180 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 ENTPD2Q9Y5L3 495 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 A0A0J9YY10 115 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 A0A1W2PQL4 384 aaPredicted RBP16.31■□□□□ 0.2
USH1C-205ENST00000527020 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 UNC119BA6NIH7 251 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 TBXA2RP21731 343 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 CASP3P42574 277 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 RFX2P48378 723 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 COPZ1P61923 177 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 FIGNL1Q6PIW4 674 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 DGAT2L6Q6ZPD8 337 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ZAR1Q86SH2 424 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 SETD6Q8TBK2 473 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ANKRD9Q96BM1 317 aaPredicted RBP16.31■□□□□ 0.2
USH1C-205ENST00000527020 CTHRC1Q96CG8 243 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 TEX12Q9BXU0 123 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 STARD5Q9NSY2 213 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 POT1Q9NUX5 634 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 HRASLS2Q9NWW9 162 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 SIDT1Q9NXL6 827 aaKnown RBP16.31■□□□□ 0.2
USH1C-205ENST00000527020 TRDV1A0A1B0GX56 115 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 APOA1P02647 267 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 HMGN1P05114 100 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 CTSBP07858 339 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ACSM1Q08AH1 577 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ZNF542PQ5EBM4 170 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 NRARPQ7Z6K4 114 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ABI3BPQ7Z7G0 1075 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 AKAP14Q86UN6 197 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 ZNF761Q86XN6 746 aaPredicted RBP16.31■□□□□ 0.2
USH1C-205ENST00000527020 CSNK1A1LQ8N752 337 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 SLC37A2Q8TED4 501 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 TMEM239Q8WW34 195 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 TMCO6Q96DC7 493 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 NEDD4LQ96PU5 975 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 JAM3Q9BX67 310 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 TIGARQ9NQ88 270 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 CLCA2Q9UQC9 943 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 HS3ST3A1Q9Y663 406 aa16.31■□□□□ 0.2
USH1C-205ENST00000527020 BHLHE40O14503 412 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 IGHV4-34P06331 123 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 IL7P13232 177 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 CAV3P56539 151 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 ZCCHC12Q6PEW1 402 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 B3GLCTQ6Y288 498 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 CXXC5Q7LFL8 322 aaKnown RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 OR52N1Q8NH53 320 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 SPRYD4Q8WW59 207 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 CLDND1Q9NY35 253 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 SHISA3A0PJX4 238 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 FAM221BA6H8Z2 402 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 BRINP1O60477 761 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 SEMA4FO95754 770 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 TNFP01375 233 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 VSX2P58304 361 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 DBPQ10586 325 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 EIF2B5Q13144 721 aaKnown RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 MANEAQ5SRI9 462 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 PLBD1Q6P4A8 553 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 RNF113BQ8IZP6 322 aaKnown RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 KLHL36Q8N4N3 616 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 HOXB13Q92826 284 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 TIMP4Q99727 224 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 MED20Q9H944 212 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 KRCC1Q9NPI7 259 aaPredicted RBP16.3■□□□□ 0.2
USH1C-205ENST00000527020 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
USH1C-205ENST00000527020 A0A1W2PQ09 198 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 ZC3H12DA2A288 527 aaKnown RBP16.29■□□□□ 0.2
USH1C-205ENST00000527020 SGK494L7N484 410 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 FMO6PO60774 539 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 CBX7O95931 251 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 IFI30P13284 250 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 GABRA3P34903 492 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 LTBRP36941 435 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 INSL4Q14641 139 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 EOGTQ5NDL2 527 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 NIPAL3Q6P499 406 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 ZNF322Q6U7Q0 402 aaPredicted RBP16.29■□□□□ 0.2
USH1C-205ENST00000527020 ARHGEF39Q8N4T4 335 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 TMED9Q9BVK6 235 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 HCAR1Q9BXC0 346 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 FAM60AQ9NP50 221 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 GSTK1Q9Y2Q3 226 aa16.29■□□□□ 0.2
USH1C-205ENST00000527020 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
USH1C-205ENST00000527020 IFI6P09912 130 aa16.28■□□□□ 0.2
USH1C-205ENST00000527020 CELP19835 753 aa16.28■□□□□ 0.2
USH1C-205ENST00000527020 POU6F2P78424 691 aaPredicted RBP16.28■□□□□ 0.2
USH1C-205ENST00000527020 FAM131AQ6UXB0 335 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms