RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PRKAA2P54646 552 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 PSPHP78330 225 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF763Q0D2J5 394 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 HEPACAMQ14CZ8 416 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 DECR1Q16698 335 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 HEPHL1Q6MZM0 1159 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 ANKRD26P1Q6NSI1 321 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 GTPBP8Q8N3Z3 284 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 CIDECQ96AQ7 238 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 L3HYPDHQ96EM0 354 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 OTUB1Q96FW1 271 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 RNF145Q96MT1 663 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 BBS4Q96RK4 519 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 GDF2Q9UK05 429 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 MAGED1Q9Y5V3 778 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 A0A1W2PPM1 405 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 C7orf72A4D263 438 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 PPP3CBP16298 524 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 ZNF17P17021 662 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 HMOX2P30519 316 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 ACVR1BP36896 505 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 C17orf67Q0P5P2 114 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 FGFBP1Q14512 234 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 TAB1Q15750 504 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 SGCBQ16585 318 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 KRT71Q3SY84 523 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 SAMD14Q8IZD0 417 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-201ENST00000526271 KBTBD8Q8NFY9 601 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 CDC26Q8NHZ8 85 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 FBXO30Q8TB52 745 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 ABHD3Q8WU67 409 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 SLCO5A1Q9H2Y9 848 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 C12orf49Q9H741 205 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 PTGES2Q9H7Z7 377 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 COQ10BQ9H8M1 238 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 GIMAP4Q9NUV9 329 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 ZNF446Q9NWS9 450 aa12.7□□□□□ -0.38
CPSF1-201ENST00000526271 DPRXA6NFQ7 191 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 G3V2L1 256 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 GPRIN2O60269 458 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 ENO1P06733 434 aaKnown RBP12.69□□□□□ -0.38
CPSF1-201ENST00000526271 LINGO3P0C6S8 592 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 FCGR2AP12318 317 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 PRIM2P49643 509 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
CPSF1-201ENST00000526271 RPS3AP61247 264 aaKnown RBP12.69□□□□□ -0.38
CPSF1-201ENST00000526271 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 DMTNQ08495 405 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 LCP2Q13094 533 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 PPP4R4Q6NUP7 873 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 TRABD2AQ86V40 505 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 GFM2Q969S9 779 aaKnown RBP12.69□□□□□ -0.38
CPSF1-201ENST00000526271 C16orf58Q96GQ5 468 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 CXorf56Q9H5V9 222 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 TMBIM4Q9HC24 238 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 Q9N2J8 555 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 EQTNQ9NQ60 294 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 SDHAF3Q9NRP4 125 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
CPSF1-201ENST00000526271 SENP1Q9P0U3 644 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 NTMQ9P121 344 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 EMC9Q9Y3B6 208 aa12.69□□□□□ -0.38
CPSF1-201ENST00000526271 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 DYNC1I1O14576 645 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-201ENST00000526271 RAMP1O60894 148 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 ADAM11O75078 769 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 SASH3O75995 380 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 NGFRP08138 427 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 PYGBP11216 843 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 PTNP21246 168 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 ATP5F1P24539 256 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-201ENST00000526271 FRKP42685 505 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-201ENST00000526271 RPS4XP62701 263 aaKnown RBP12.68□□□□□ -0.38
CPSF1-201ENST00000526271 RAC1P63000 192 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 VEZF1Q14119 521 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 TOMM34Q15785 309 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-201ENST00000526271 DUSP5Q16690 384 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 CCNJQ5T5M9 372 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
CPSF1-201ENST00000526271 NOXRED1Q6NXP6 359 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms