RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 THRBP10828 461 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 IGLL1P15814 213 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 MGMTP16455 207 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 ADRA1AP35348 466 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 RIPK4P57078 832 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 OSTNP61366 133 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 HSF2Q03933 536 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 EGFEM1PQ0D2K5 195 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 ST3GAL3Q11203 375 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 CAPRIN1Q14444 709 aaKnown RBP2.93□□□□□ -1.94
CD44-215ENST00000525241 ELAVL3Q14576 367 aaKnown RBP2.93□□□□□ -1.94
CD44-215ENST00000525241 CHI3L2Q15782 390 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 FAM74A3Q4VXF1 159 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 OR8G2PQ6IF36 304 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 SCYL2Q6P3W7 929 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 ERASQ7Z444 233 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 HSD17B13Q7Z5P4 300 aaPredicted RBP2.93□□□□□ -1.94
CD44-215ENST00000525241 TMEM179BQ7Z7N9 219 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 OR5AU1Q8NGC0 362 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 M1APQ8TC57 530 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 SETD7Q8WTS6 366 aaKnown RBP2.93□□□□□ -1.94
CD44-215ENST00000525241 IL1F10Q8WWZ1 152 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 KRT23Q9C075 422 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 RIMS3Q9UJD0 308 aa2.93□□□□□ -1.94
CD44-215ENST00000525241 ESYT2A0FGR8 921 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 SDHDO14521 159 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 EMC8O43402 210 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 LANCL1O43813 399 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 HBQ1P09105 142 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PDHBP11177 359 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 ARF4P18085 180 aaPredicted RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 VDAC1P21796 283 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PAICSP22234 425 aaKnown RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 ATP5A1P25705 553 aaKnown RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 MAPK3P27361 379 aaPredicted RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 CCND2P30279 289 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 WNT4P56705 351 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 BDH1Q02338 343 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 CKAP4Q07065 602 aaKnown RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 TRIP10Q15642 601 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 CDC37Q16543 378 aaPredicted RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 IL17AQ16552 155 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 LRRC36Q1X8D7 754 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 CCDC14Q49A88 953 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 LINC01620Q4KN68 170 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 ANKRD37Q7Z713 158 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PPP1R27Q86WC6 154 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 ERI1Q8IV48 349 aaKnown RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 MISPQ8IVT2 679 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 BBS1Q8NFJ9 593 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 FGGYQ96C11 551 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 HPDLQ96IR7 371 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 SLC30A2Q9BRI3 323 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PPDPFQ9H3Y8 114 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PTGES2Q9H7Z7 377 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 PAK1IP1Q9NWT1 392 aaPredicted RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 MRPL39Q9NYK5 338 aaKnown RBP2.92□□□□□ -1.94
CD44-215ENST00000525241 RPS6KB2Q9UBS0 482 aa2.92□□□□□ -1.94
CD44-215ENST00000525241 LOC100131303A0A0U1RQF7 123 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 CHADO15335 359 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 ZNF861PO60384 105 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 TBL1XO60907 577 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 TIMP1P01033 207 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 OR8U8P0C7N1 319 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 KIR2DS2P43631 304 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 BDKRB1P46663 353 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 GMFBP60983 142 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 NTHL1P78549 312 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 ZNF45Q02386 682 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 RGS1Q08116 209 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 PSG7Q13046 419 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 AANATQ16613 207 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 ZNF311Q5JNZ3 666 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 NIPAL3Q6P499 406 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 UNC5DQ6UXZ4 953 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 Q6ZVH6 145 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 CATSPER4Q7RTX7 472 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 GCNT2Q8N0V5 402 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 LINC01561Q8N1V8 128 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 CNIH3Q8TBE1 160 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 SELENOMQ8WWX9 145 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 NEIL2Q969S2 332 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 MARC2Q969Z3 335 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 SDSLQ96GA7 329 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 VPS35Q96QK1 796 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 NICN1Q9BSH3 213 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 CNPY3Q9BT09 278 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 FICDQ9BVA6 458 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 RHOJQ9H4E5 214 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 FANCFQ9NPI8 374 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 RDH8Q9NYR8 311 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 HOOK1Q9UJC3 728 aaKnown RBP2.91□□□□□ -1.94
CD44-215ENST00000525241 ANAPC7Q9UJX3 599 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 B9D1Q9UPM9 204 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 MEGF6O75095 1541 aa2.91□□□□□ -1.94
CD44-215ENST00000525241 TDRD6O60522 2096 aaKnown RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 IGHV7-81A0A0B4J1V7 117 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 TUBAL3A6NHL2 446 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms