RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ABCD2Q9UBJ2 740 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 LNPEPQ9UIQ6 1025 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 CTNND2Q9UQB3 1225 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 NSG2Q9Y328 171 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ZNF175Q9Y473 711 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 YIPF1Q9Y548 306 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 NOX1Q9Y5S8 564 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ETV7Q9Y603 341 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PIK3C2BO00750 1634 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SETBP1Q9Y6X0 1596 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 AK9Q5TCS8 1911 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CCDC141Q6ZP82 1450 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CASKIN1Q8WXD9 1431 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZC3H13Q5T200 1668 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 XDHP47989 1333 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ALKQ9UM73 1620 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF503-AS2A6NEH8 195 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 LRRN3E7EW58 273 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 E7EWF7 191 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 OR7A17O14581 309 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZBTB5O15062 677 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MID1O15344 667 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 B4GALT5O43286 388 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 B3GAT3O94766 335 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MMP3P08254 477 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CD59P13987 128 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ST6GAL1P15907 406 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ENGP17813 658 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 IGFBP6P24592 240 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 PCSK6P29122 969 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MATKP42679 507 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 HTR5AP47898 357 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RFX3P48380 749 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 NOVA1P51513 510 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 TAS2R38P59533 333 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RAB10P61026 200 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RPL10AP62906 217 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 CDR2Q01850 454 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CYP24A1Q07973 514 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 FOXE3Q13461 319 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 KRT81Q14533 505 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 PTPRRQ15256 657 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 OR1C1Q15619 314 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ELAVL1Q15717 326 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 KCNMB1Q16558 191 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MLANAQ16655 118 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 EXOC3L4Q17RC7 722 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF699Q32M78 642 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 SPATS1Q496A3 300 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 C2CD6Q53TS8 623 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ELFN2Q5R3F8 820 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CELF3Q5SZQ8 465 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 AGAP7PQ5VUJ5 663 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 C1QL3Q5VWW1 255 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF776Q68DI1 518 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 RHBDF2Q6PJF5 856 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 PRSS57Q6UWY2 283 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 DPY19L2P2Q6ZN68 376 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CYB5R4Q7L1T6 521 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 WDR53Q7Z5U6 358 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF546Q86UE3 836 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MMD2Q8IY49 270 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MB21D2Q8IYB1 491 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 SYS1Q8N2H4 156 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 LNX2Q8N448 690 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 CSNK1A1LQ8N752 337 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 HORMAD2Q8N7B1 307 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ARL14EPQ8N8R7 260 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 C19orf18Q8NEA5 215 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ABHD4Q8TB40 342 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ZNF473Q8WTR7 871 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 CCDC107Q8WV48 283 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TMEM239Q8WW34 195 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TCP11Q8WWU5 503 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 IRGQQ8WZA9 623 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 NR4A3Q92570 626 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 JSRP1Q96MG2 331 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 NSMCE3Q96MG7 304 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 AGAP4Q96P64 663 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MBOAT4Q96T53 435 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 GPR174Q9BXC1 333 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TEX101Q9BY14 249 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 NPFFR1Q9GZQ6 430 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 GBA3Q9H227 469 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 NXF3Q9H4D5 531 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 ANKRD19PQ9H560 264 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TRIM45Q9H8W5 580 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 WDR54Q9H977 334 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 FOLH1BQ9HBA9 442 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 PRSS16Q9NQE7 514 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RNF146Q9NTX7 359 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TECRQ9NZ01 308 aaKnown RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 MYEF2Q9P2K5 600 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms