RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 EEF1E1O43324 174 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 HCRTR2O43614 444 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 UQCRC2P22695 453 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 SSTR2P30874 369 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 LCN1P31025 176 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 ASCL1P50553 236 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 CLNS1AP54105 237 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 MYBPHQ13203 477 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 NDUFAF6Q330K2 333 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 GLYR1Q49A26 553 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 FLYWCH1Q4VC44 716 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 KLHL26Q53HC5 615 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 ZNF614Q8N883 585 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 B4GALNT2Q8NHY0 566 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 RAB8BQ92930 207 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 WNT2BQ93097 391 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 ZNF845Q96IR2 970 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 LURAP1Q96LR2 239 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 OR52B2Q96RD2 323 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 SDF2Q99470 211 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 TM9SF2Q99805 663 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 INPP5KQ9BT40 448 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 MED17Q9NVC6 651 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 CARD8Q9Y2G2 431 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 PKDREJQ9NTG1 2253 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 DOCK7Q96N67 2140 aa11.59□□□□□ -0.55
TRAPPC4-205ENST00000525079 FBN2P35556 2912 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 NOTCH2Q04721 2471 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 A0A1W2PQD3 144 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 GTPBP1O00178 669 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 SYT5O00445 386 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF195O14628 629 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 FCMRO60667 390 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 DIAPH2O60879 1101 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 RCBTB2O95199 551 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 GSNP06396 782 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR12D1P0DN82 309 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 OPRM1P35372 400 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 CHI3L1P36222 383 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ATP12AP54707 1039 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF117Q03924 483 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 GPR68Q15743 365 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 TMEM44Q2T9K0 475 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 TNFAIP8L2Q6P589 184 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 CBLN3Q6UW01 205 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 MISPQ8IVT2 679 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 GOT1L1Q8NHS2 421 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 RFWD2Q8NHY2 731 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 PIWIL2Q8TC59 973 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 XAGE5Q8WWM1 108 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 FIG4Q92562 907 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 C14orf79Q96F83 325 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 OR52E6Q96RD3 313 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 UCN2Q96RP3 112 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZBTB18Q99592 522 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 SH3GL2Q99962 352 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF559Q9BR84 538 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 SLC35A5Q9BS91 424 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 PINK1Q9BXM7 581 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 HOXD1Q9GZZ0 328 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 MKLN1Q9UL63 735 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 L3MBTL1Q9Y468 752 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-205ENST00000525079 APCP25054 2843 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 A0A087WZY1 265 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 CENPVL1A0A0U1RR11 272 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 SLC22A20A6NK97 555 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 DUXAA6NLW8 204 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 LINC01387J3KSC0 135 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 EIF1AYO14602 144 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 KLF11O14901 512 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 TNFRSF21O75509 655 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 SOX30O94993 753 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 NUDT14O95848 222 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 PGRP06401 933 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 IL11P20809 199 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 CDKN2CP42773 168 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF41P51814 821 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 DPY19L1Q2PZI1 675 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 PLPPR5Q32ZL2 321 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 PDZK1Q5T2W1 519 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 SAXO2Q658L1 398 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 PPP4R4Q6NUP7 873 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZNF621Q6ZSS3 439 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 HDXQ7Z353 690 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 C16orf62Q7Z3J2 963 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 HMGN2P46Q86SG4 172 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 LUZP2Q86TE4 346 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 ZZZ3Q8IYH5 903 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 POC1BQ8TC44 478 aa11.57□□□□□ -0.56
TRAPPC4-205ENST00000525079 ACTRT2Q8TDY3 377 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms