RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 AP4B1Q9Y6B7 739 aa16.73■□□□□ 0.27
CAPN1-203ENST00000525013 AKAP9Q99996 3911 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 A0A087WZY1 265 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 A6NNC1 897 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 TNFRSF21O75509 655 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 SMNDC1O75940 238 aaKnown RBP eCLIP16.72■□□□□ 0.27
CAPN1-203ENST00000525013 ZNF41P51814 821 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-203ENST00000525013 C21orf58P58505 322 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 HBA1P69905 142 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 SGCBQ16585 318 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 FBXW10Q5XX13 1052 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 OR4F3Q6IEY1 312 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 BHLHB9Q6PI77 547 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 MISPQ8IVT2 679 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 KIRREL3Q8IZU9 778 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 ZNF845Q96IR2 970 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-203ENST00000525013 NUF2Q9BZD4 464 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 DPY30Q9C005 99 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 RASSF1Q9NS23 344 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 GPATCH2Q9NW75 528 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 GALNT8Q9NY28 637 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 KCNE3Q9Y6H6 103 aa16.72■□□□□ 0.27
CAPN1-203ENST00000525013 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 NPIPA5A0A0B4J1W7 369 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 NPIPA7E9PJI5 369 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 TNFSF13O75888 250 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 SOX30O94993 753 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 CRHP06850 196 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 NPIPA8P0DM63 369 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 EPXP11678 715 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 ZNF17P17021 662 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 CPOXP36551 454 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 RNF144AP50876 292 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-203ENST00000525013 SIRPAP78324 504 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 SORDQ00796 357 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 BST1Q10588 318 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 PON3Q15166 354 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 TMEM44Q2T9K0 475 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 DCST2Q5T1A1 773 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 CLECL1Q8IZS7 167 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 ZNF527Q8NB42 609 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 FNDC9Q8TBE3 224 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 PHOSPHO1Q8TCT1 267 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 HOXD1Q9GZZ0 328 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 MED17Q9NVC6 651 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 PNPOQ9NVS9 261 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 PCDHGB4Q9UN71 923 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 ZNF175Q9Y473 711 aa16.71■□□□□ 0.27
CAPN1-203ENST00000525013 ITPR3Q14573 2671 aa16.71■□□□□ 0.26
CAPN1-203ENST00000525013 HEATR5AQ86XA9 2040 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 A0A1W2PQD3 144 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 A8MXE2 369 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 H3BNH8 94 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 EIF1AYO14602 144 aaKnown RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 OPN1LWP04000 364 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 DNAJA1P31689 397 aaKnown RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 EIF1AXP47813 144 aaKnown RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 RPS26P62854 115 aaKnown RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 DAZAP2Q15038 168 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 CD226Q15762 336 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 VWA1Q6PCB0 445 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 CAMKMTQ7Z624 323 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 WDR75Q8IWA0 830 aaKnown RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 GTPBP8Q8N3Z3 284 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-203ENST00000525013 B4GALNT2Q8NHY0 566 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 MGARPQ8TDB4 240 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 ACTRT2Q8TDY3 377 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 ZBTB8AQ96BR9 441 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 OR7D2Q96RA2 312 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 PRRG4Q9BZD6 226 aa16.7■□□□□ 0.26
CAPN1-203ENST00000525013 TMEM120BA0PK00 339 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 GTPBP1O00178 669 aaKnown RBP16.69■□□□□ 0.26
CAPN1-203ENST00000525013 MSTNO14793 375 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 NUDT14O95848 222 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 LBPP18428 481 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 MATN1P21941 496 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 PLPPR5Q32ZL2 321 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 C6orf120Q7Z4R8 191 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 BTLAQ7Z6A9 289 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 GGNQ86UU5 652 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 ANKRD46Q86W74 232 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 CLEC4FQ8N1N0 589 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 METTL25Q8N6Q8 603 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 ZNF614Q8N883 585 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 OR5D16Q8NGK9 328 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 OR4A15Q8NGL6 344 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 RNF145Q96MT1 663 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 NPAS1Q99742 590 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 TMEM185BQ9H7F4 350 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 HAO1Q9UJM8 370 aa16.69■□□□□ 0.26
CAPN1-203ENST00000525013 RNF103-CHMP3A0A140T963 221 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 FAM221AA4D161 298 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 RNASET2O00584 256 aaKnown RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 ERLIN1O75477 346 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 CPSF4O95639 269 aaKnown RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 ME2P23368 584 aa16.68■□□□□ 0.26
CAPN1-203ENST00000525013 KIR2DL2P43627 348 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-203ENST00000525013 ART1P52961 327 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms