RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SDHCQ99643 169 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 UCK1Q9HA47 277 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 MRPS18AQ9NVS2 196 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 HCN3Q9P1Z3 774 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 TESQ9UGI8 421 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 MRPS33Q9Y291 106 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CDH10Q9Y6N8 788 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 A0A0A6YYC8 382 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 NPIPA5A0A0B4J1W7 369 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CDHR4A6H8M9 788 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 LILRA5A6NI73 299 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 NPIPA7E9PJI5 369 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 I3L1I5 382 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 SRPX2O60687 465 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 FMO6PO60774 539 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 SOX30O94993 753 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CBX7O95931 251 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 WNT1P04628 370 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 NPIPA8P0DM63 369 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 FASLGP48023 281 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 RAB40BQ12829 278 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNHIT3Q15649 155 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 TMEM44Q2T9K0 475 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CCBE1Q6UXH8 406 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 PHC2Q8IXK0 858 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 ADAMTS18Q8TE60 1221 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 FBXO34Q9NWN3 711 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 FBXL21Q9UKT6 434 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 GPR52Q9Y2T5 361 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CAB39Q9Y376 341 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 THADAQ6YHU6 1953 aa12.77□□□□□ -0.36
LDLRAD3-202ENST00000524419 BLACEA4D250 179 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 BRINP1O60477 761 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 NKX2-2O95096 273 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 GKN3PP0CG01 181 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 PRG2P13727 222 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 HTR2AP28223 471 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 GAS6Q14393 721 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 PGGHGQ32M88 737 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 SLC38A3Q99624 504 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 MAP3K3Q99759 626 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 BARHL1Q9BZE3 327 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 ISYNA1Q9NPH2 558 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 MED17Q9NVC6 651 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 C14orf105Q9NVL8 296 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 IL20Q9NYY1 176 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
LDLRAD3-202ENST00000524419 IQCMA0A1B0GVH7 501 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 A0A1W2PR77 199 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 UNC119BA6NIH7 251 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 SURF4O15260 269 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 CPEP16870 476 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 ETV5P41161 510 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 MLLT3P42568 568 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 MTNR1AP48039 350 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 ETV1P50549 477 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 RNF144AP50876 292 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 BNC1Q01954 994 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 RUNX1T1Q06455 604 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 STX4Q12846 297 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 UBXN2BQ14CS0 331 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 SLC30A6Q6NXT4 461 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 PAQR6Q6TCH4 344 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR6C4Q8NGE1 309 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 HOXB13Q92826 284 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 RFKQ969G6 155 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMCO6Q96DC7 493 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 FOLH1BQ9HBA9 442 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 MRPS17Q9Y2R5 130 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 EXOSC1Q9Y3B2 195 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 CACNA1IQ9P0X4 2223 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 STK25O00506 426 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 DYRK3O43781 588 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 IL1AP01583 271 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 HMGN1P05114 100 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 CDH11P55287 796 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMPRSS11AQ6ZMR5 421 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF595Q8IYB9 648 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms