RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CPXM2Q8N436 756 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 CHCHD4Q8N4Q1 142 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 TOP6BLQ8N6T0 577 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 TRIM43Q96BQ3 446 aaPredicted RBP9.52□□□□□ -0.88
SPIDR-224ENST00000524126 FUBP3Q96I24 572 aaKnown RBP eCLIP9.52□□□□□ -0.88
SPIDR-224ENST00000524126 ZNF75AQ96N20 296 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 MTERF1Q99551 399 aaKnown RBP9.52□□□□□ -0.88
SPIDR-224ENST00000524126 MNTQ99583 582 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 PAAF1Q9BRP4 392 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 SLC35A5Q9BS91 424 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 MFFQ9GZY8 342 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 TLNRD1Q9H1K6 362 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 WDR13Q9H1Z4 485 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 EGLN3Q9H6Z9 239 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 TDP1Q9NUW8 608 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 PCDHGA5Q9Y5G8 931 aa9.52□□□□□ -0.88
SPIDR-224ENST00000524126 PRODHO43272 600 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SMAD6O43541 496 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 RNF13O43567 381 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 AQP8O94778 261 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 UBXN7O94888 489 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 NFATC1O95644 943 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 C6orf47O95873 294 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CH25HO95992 272 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 IFNGR1P15260 489 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 IDSP22304 550 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 THPOP40225 353 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 GIPRP48546 466 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 DCDP81605 110 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SORDQ00796 357 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 EIF2S3LQ2VIR3 472 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SLC22A10Q63ZE4 541 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 FCRLBQ6BAA4 426 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 ADNP2Q6IQ32 1131 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 FUT10Q6P4F1 479 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 TMPRSS11BQ86T26 416 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 WDSUB1Q8N9V3 476 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 OR4D11Q8NGI4 311 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 GOT1L1Q8NHS2 421 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SLC7A13Q8TCU3 470 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CSGALNACT1Q8TDX6 532 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CA5BP1Q8WTZ4 195 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF296Q8WUU4 475 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 IGSF8Q969P0 613 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PNPLA2Q96AD5 504 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 MRPL38Q96DV4 380 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 NOX3Q9HBY0 568 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 ASF1BQ9NVP2 202 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 C2orf42Q9NWW7 574 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 E7EQ34 232 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 GOSR2O14653 212 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CREBL2O60519 120 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PRAF2O60831 178 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 UBL3O95164 117 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SLC25A14O95258 325 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 LPOP22079 712 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 BDKRB2P30411 391 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CD52P31358 61 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 RPL3P39023 403 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PNPLA4P41247 253 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 RIDAP52758 137 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CASP6P55212 293 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 DEFA6Q01524 100 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 LINC00303Q3SY05 128 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 APOOLQ6UXV4 268 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 LRRTM4Q86VH4 590 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 HORMAD2Q8N7B1 307 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 SETD7Q8WTS6 366 aaKnown RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 RGMAQ96B86 450 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 ZDHHC12Q96GR4 267 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 TOX2Q96NM4 488 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PCDHB10Q9UN67 800 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 CORO2BQ9UQ03 480 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 PCDHGA1Q9Y5H4 931 aa9.52□□□□□ -0.89
SPIDR-224ENST00000524126 MYO10Q9HD67 2058 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 RANBP2P49792 3224 aaKnown RBP9.51□□□□□ -0.89
SPIDR-224ENST00000524126 A0A1W2PPK0 400 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 A0A1W2PRB8 838 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 WASH3PC4AMC7 463 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
SPIDR-224ENST00000524126 SLC25A12O75746 678 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 PTHLHP12272 177 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 MMP11P24347 488 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 HOXC8P31273 242 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 PTGER3P43115 390 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 DGKGP49619 791 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 LUMP51884 338 aaPredicted RBP9.51□□□□□ -0.89
SPIDR-224ENST00000524126 FZD5Q13467 585 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 AKIRIN2Q53H80 203 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 CLEC12AQ5QGZ9 265 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 ZNF626Q68DY1 528 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 TCTN3Q6NUS6 607 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 FAM180BQ6P0A1 224 aa9.51□□□□□ -0.89
SPIDR-224ENST00000524126 SLC36A4Q6YBV0 504 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms